Pairwise Orthologs for HUMAN96651

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN96651 (IFNK_HUMAN)

E Homo sapiens | Interferon kappa [IFNK]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Pygocentrus nattereri	PYGNA26848		A0A3B4C2X3
			E	Loxodonta africana	LOXAF17421		G3SUU7
			E	Echinops telfairi	ECHTE13937		ENSETEG00000019605
			E	Oryctolagus cuniculus	RABIT00204		G1TYS8
			E	Fukomys damarensis	FUKDA13048		ENSFDAG00000012877.1
			E	Heterocephalus glaber	HETGA08946		A0A0P6JLQ1
			E	Cavia porcellus	CAVPO01256		H0WDY0
			E	Cricetulus griseus	CRIGR11838		G3HJ33
			E	Mus musculus	MOUSE42541		IFNK_MOUSE
			E	Rattus norvegicus	RATNO32543		A6IIP3
			E	Ictidomys tridecemlineatus	ICTTR09983		ENSSTOG00000021705
			E	Chlorocebus sabaeus	CHLSB03310		A0A0D9S9M1
			E	Macaca mulatta	MACMU11809		A0A8J8XVK7
			E	Papio anubis	PAPAN07393		A0A8I5N7X9
			E	Gorilla gorilla gorilla	GORGO41899		G3S4T3
			E	Pan troglodytes	PANTR43771		A0A7R8GUN8
			E	Pongo abelii	PONAB36429		H2PRZ6
			E	Nomascus leucogenys	NOMLE39902		G1QXN1
			E	Aotus nancymaae	AOTNA23829		A0A2K5BVC7
			E	Microcebus murinus	MICMU13982		ENSMICG00000004858
			E	Otolemur garnettii	OTOGA17624		H0WK94
			E	Bos indicus x Bos taurus	BOBOX31673		A0A4W2EN96
			E	Bos taurus	BOVIN34219		E1BJ91
			E	Capra hircus	CAPHI28777		A0A452EV67
			E	Ovis aries	SHEEP09201		W5PZ39

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