Pairwise Orthologs for HUMAN86592

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN86592 (EYA4_HUMAN)

E Homo sapiens | Eyes absent homolog 4 [EYA4]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO01540		A0A401PE56
			E	Chiloscyllium punctatum	CHIPU09132		A0A401SK37
			E	Callorhinchus milii	CALMI31505		A0A4W3JMT6
			E	Lepisosteus oculatus	LEPOC00582		W5NHA6
			E	Anguilla anguilla	ANGAN24960		XP_035279430
			E	Anabas testudineus	ANATE31378		ENSATEG00000004763.1
			E	Seriola dumerili	SERDU01705		A0A3B4UHF5
			E	Echeneis naucrates	ECHNA30878		A0A665V661
			E	Cynoglossus semilaevis	CYNSE00428		A0A3P8WBU4
			E	Scophthalmus maximus	SCOMX17410		ENSSMAG00000010837.1
			E	Dicentrarchus labrax	DICLA17023		A0A8C4E9E6
			E	Gasterosteus aculeatus	GASAC07286		G3PA57
			E	Sparus aurata	SPAAU61892		A0A671WAU3
			E	Mola mola	MOLML14165		A0A3Q3XD38
			E	Takifugu rubripes	TAKRU14346		A0A674MS53
			E	Tetraodon nigroviridis	TETNG04673		H3DFX7
			E	Oryzias javanicus	ORYJA01063		ENSOJAG00000020302.1
			E	Oryzias latipes	ORYLA11727		ENSORLG00000016484
			E	Oryzias melastigma	ORYME16097		A0A3B3DQ96
			E	Nothobranchius furzeri	NOTFU06832		A0A9D2Z1Z1
			E	Kryptolebias marmoratus	KRYMA18251		A0A3Q3FWD7
			E	Cyprinodon variegatus	CYPVA12563		A0A3Q2ED13
			E	Gambusia affinis	GAMAF01680		ENSGAFG00000003722.1
			E	Poecilia formosa	POEFO06923		A0A096LWK3
			E	Poecilia reticulata	POERE18776		A0A3P9P3D3

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