Pairwise Orthologs for HUMAN84507

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN84507 (D6RBM8)

E Homo sapiens | non-specific serine/threonine protein kinase [SRPK1]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN84501.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Bodo saltans	BODSA01883		A0A0S4JMD1
			E	Trypanosoma brucei brucei (strain 927/4 GUTat10.1)	TRYB205616		Q586G9
			E	Echeneis naucrates	ECHNA00706		A0A665TUQ4
			E	Oryzias javanicus	ORYJA19050		ENSOJAG00000013638.1
			E	Oreochromis aureus	OREAU08167		A0A668TEI3
			E	Salmo trutta	SALTR33298		A0A674AVN9
			E	Ictalurus punctatus	ICTPU16217		ENSIPUG00000023963.1
			E	Cyprinus carpio carpio	CYPCA124353		A0A8C1D2N0
			E	Danio rerio	DANRE02963		ENSDARG00000031560.8
			E	Ornithorhynchus anatinus	ORNAN24786		A0A6I8PHB0
			E	Tachyglossus aculeatus	TACAU08273		XP_038604665
			E	Procavia capensis	PROCA09073		ENSPCAG00000000885
			E	Loxodonta africana	LOXAF21044		G3SL39
			E	Echinops telfairi	ECHTE11479		ENSETEG00000013156
			E	Oryctolagus cuniculus	RABIT02363		G1SVM0
			E	Ochotona princeps	OCHPR10654		ENSOPRG00000000826
			E	Dipodomys ordii	DIPOR19283		ENSDORG00000028527.1
			E	Fukomys damarensis	FUKDA17452		ENSFDAG00000000282.1
			E	Heterocephalus glaber	HETGA19346		ENSHGLG00100009839.1
			E	Cavia aperea	CAVAP06489		ENSCAPG00000001385.1
			E	Cavia porcellus	CAVPO08659		H0V2J5
			E	Chinchilla lanigera	CHILA10198		A0A8C2YQ91
			E	Octodon degus	OCTDE02039		ENSODEG00000016786.1
			E	Jaculus jaculus	JACJA00665		A0A8C5LAZ1
			E	Cricetulus griseus	CRIGR18219		ENSCGRG00000002403.1

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