Pairwise Orthologs for HUMAN84306

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN84306 (TPSN_HUMAN)

E Homo sapiens | Tapasin [TAPBP]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN84303.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Anabas testudineus	ANATE04791		A0A3Q1JTX4
			E	Seriola dumerili	SERDU21645		A0A3B4TZF2
			E	Echeneis naucrates	ECHNA19515		A0A665V2Z3
			E	Cynoglossus semilaevis	CYNSE00787		A0A3P8WTZ4
			E	Dicentrarchus labrax	DICLA50630		A0A8C4DPA8
			E	Sparus aurata	SPAAU21634		A0A671TGC6
			E	Mola mola	MOLML28769		A0A3Q3WSF1
			E	Oryzias latipes	ORYLA01910		ENSORLG00000006820
			E	Oryzias melastigma	ORYME01258		A0A3B3CX04
			E	Nothobranchius furzeri	NOTFU28789		A0A1A7Z811
			E	Kryptolebias marmoratus	KRYMA18524		A0A3Q3BG39
			E	Cyprinodon variegatus	CYPVA09645		A0A3Q2DKM6
			E	Gambusia affinis	GAMAF27937		ENSGAFG00000019372.1
			E	Poecilia formosa	POEFO12344		A0A087X7S7
			E	Poecilia reticulata	POERE04217		A0A3P9N225
			E	Xiphophorus maculatus	XIPMA06183		M4AQY6
			E	Haplochromis burtoni	HAPBU33111		A0A3Q3C047
			E	Neolamprologus brichardi	NEOBR14441		A0A3Q4HUX2
			E	Oreochromis niloticus	ORENI41402		I3JNX2
			E	Amphiprion ocellaris	AMPOC31085		A0A3Q1AQV1
			E	Amphiprion percula	AMPPE26337		A0A3P8T5F2
			E	Hippocampus comes	HIPCM26158		A0A3Q2XLI9
			E	Esox lucius	ESOLU28681		A0A6Q2YRS6
			E	Astyanax mexicanus	ASTMX08731		ENSAMXG00000014158
			E	Pygocentrus nattereri	PYGNA17121		A0A3B4DM93

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