Pairwise Orthologs for HUMAN84220

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN84220 (Q5Y7D6)

E Homo sapiens | HLA class II histocompatibility antigen DQ beta ch [HLA-DQB1]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN84218.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Tachyglossus aculeatus	TACAU32381		XP_038598148
			E	Loxodonta africana	LOXAF00491		G3TN16
			E	Oryctolagus cuniculus	RABIT02299		ENSOCUG00000002485.3
			E	Fukomys damarensis	FUKDA23183		A0A091E458
			E	Cavia porcellus	CAVPO08421		A0A286XHZ3
			E	Chinchilla lanigera	CHILA10116		A0A8C2VNH6
			E	Mus musculus	MOUSE20153		HB2A_MOUSE
			E	Ictidomys tridecemlineatus	ICTTR17638		ENSSTOG00000020276
			E	Cercocebus atys	CERAT45321		A0A2K5LGN7
			E	Chlorocebus sabaeus	CHLSB06446		S4SPY7
			E	Colobus angolensis palliatus	COLAP36427		A0A2K5IPQ8
			E	Gorilla gorilla gorilla	GORGO36493		G3RPG3
			E	Pan paniscus	PANPA34093		A0A2R9CFN7
			E	Pan troglodytes	PANTR37843		H2QSR6
			E	Nomascus leucogenys	NOMLE17236		A0A2I3HL81
			E	Aotus nancymaae	AOTNA40798		A0A2K5CQG9
			E	Cebus imitator	CEBIM02740		A0A2K5R202
			E	Saimiri boliviensis boliviensis	SAIBB10900		A0A2K6S7K7
			E	Propithecus coquereli	PROCO31621		A0A2K6EY18
			E	Otolemur garnettii	OTOGA12546		H0WSJ6
			E	Bos indicus x Bos taurus	BOBOX10705		A0A4W2BYP7
			E	Bos taurus	BOVIN18689		ENSBTAG00000021077.5
			E	Mustela putorius furo	MUSPF00231		M3YH07
			E	Ailuropoda melanoleuca	AILME03480		ENSAMEG00000002342
			E	Ursus americanus	URSAM31456		A0A452QNF4

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