Pairwise Orthologs for HUMAN82715

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN82715 (A0A286YF10)

E Homo sapiens | Leukotriene C4 synthase [LTC4S]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN82713.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Rhodopseudomonas palustris (strain BisB18)	RHOPB00077		RPC_0077
			B	Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)	RHOPA04798		A0AAE7KKZ4
			B	Rhodopseudomonas palustris (strain TIE-1)	RHOPT05218		A0AAE7KKZ4
			B	Rhodopseudomonas palustris (strain DX-1)	RHOPX04885		Rpdx1_4999
			B	Rhodopseudomonas palustris (strain HaA2)	RHOP204657		RPB_4689
			B	Rhodopseudomonas palustris (strain BisB5)	RHOPS04367		RHOPS_A.4375
			E	Petromyzon marinus	PETMA07152		S4R7Z4
			E	Scyliorhinus torazame	SCYTO17167		A0A401PS79
			E	Chiloscyllium punctatum	CHIPU14835		A0A401T1F4
			E	Callorhinchus milii	CALMI38610		V9L6Y2
			E	Lepisosteus oculatus	LEPOC15086		W5N074
			E	Anguilla anguilla	ANGAN10738		XP_035264944
			E	Anabas testudineus	ANATE13115		A0A3Q1IVV3
			E	Seriola dumerili	SERDU28487		A0A3B4UM00
			E	Echeneis naucrates	ECHNA28794		A0A665UHW1
			E	Cynoglossus semilaevis	CYNSE09837		A0A3P8VWV9
			E	Scophthalmus maximus	SCOMX05037		A0A8D3A392
			E	Dicentrarchus labrax	DICLA27744		XP_051276131
			E	Gasterosteus aculeatus	GASAC20661		G3PXI2
			E	Sparus aurata	SPAAU63318		A0A671UDU1
			E	Takifugu rubripes	TAKRU09563		H2SQW7
			E	Tetraodon nigroviridis	TETNG13991		Q4S494
			E	Oryzias javanicus	ORYJA33147		ENSOJAG00000001666.1
			E	Oryzias melastigma	ORYME32016		A0A3B3CTD0
			E	Nothobranchius furzeri	NOTFU01071		A0A8C6K8J4

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