Pairwise Orthologs for HUMAN78596

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN78596 (D6RAR6)

E Homo sapiens | FAST kinase domains 3 [FASTKD3]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN78594.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL35480		C3YL02
			E	Branchiostoma lanceolatum	BRALA18597		BL12261
			E	Scyliorhinus torazame	SCYTO05245		A0A401P5U4
			E	Chiloscyllium punctatum	CHIPU03419		A0A401S3U6
			E	Callorhinchus milii	CALMI34431		A0A4W3JG97
			E	Lepisosteus oculatus	LEPOC17487		W5MZ95
			E	Anguilla anguilla	ANGAN17029		A0A9D3MMY8
			E	Anabas testudineus	ANATE01315		A0A3Q1IKG7
			E	Seriola dumerili	SERDU17774		A0A3B4U0S0
			E	Echeneis naucrates	ECHNA38620		A0A665WJ78
			E	Cynoglossus semilaevis	CYNSE21952		A0A3P8UJ95
			E	Scophthalmus maximus	SCOMX11758		A0A2U9CLJ6
			E	Dicentrarchus labrax	DICLA19171		E6ZJ49
			E	Gasterosteus aculeatus	GASAC02874		G3NJV9
			E	Sparus aurata	SPAAU46138		A0A671TTF2
			E	Mola mola	MOLML00016		A0A3Q3VRV8
			E	Takifugu rubripes	TAKRU02771		H2SWD4
			E	Tetraodon nigroviridis	TETNG11868		H3DIB4
			E	Oryzias javanicus	ORYJA25352		ENSOJAG00000012148.1
			E	Oryzias latipes	ORYLA09234		ENSORLG00000011410
			E	Oryzias melastigma	ORYME20165		A0A3B3B7S1
			E	Nothobranchius furzeri	NOTFU13075		A0A1A7Z876
			E	Kryptolebias marmoratus	KRYMA03840		A0A3Q3ATQ9
			E	Cyprinodon variegatus	CYPVA07997		A0A3Q2CQE8
			E	Gambusia affinis	GAMAF07795		ENSGAFG00000001411.1

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