Pairwise Orthologs for HUMAN78556

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN78556 (IRX2_HUMAN)

E Homo sapiens | Iroquois-class homeodomain protein IRX-2 [IRX2]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Eptatretus burgeri	EPTBU05158		A0A8C4QSV4
			E	Scyliorhinus torazame	SCYTO05449		A0A401P934
			E	Callorhinchus milii	CALMI03541		A0A4W3K5B6
			E	Lepisosteus oculatus	LEPOC02535		W5MQV2
			E	Anguilla anguilla	ANGAN02197		A0A9D3MXK1
			E	Anabas testudineus	ANATE08550		ENSATEG00000024174.1
			E	Seriola dumerili	SERDU09871		A0A3B4UPJ4
			E	Echeneis naucrates	ECHNA27192		A0A665URP4
			E	Cynoglossus semilaevis	CYNSE06171		A0A3P8UWE5
			E	Dicentrarchus labrax	DICLA15603		A0A8P4KHV5
			E	Gasterosteus aculeatus	GASAC13275		G3NTN7
			E	Sparus aurata	SPAAU60190		A0A671XMC6
			E	Mola mola	MOLML18817		A0A3Q3WFY2
			E	Takifugu rubripes	TAKRU46519		H2T2H5
			E	Tetraodon nigroviridis	TETNG12817		H3CP40
			E	Oryzias javanicus	ORYJA39107		A0A3S2MLY9
			E	Oryzias latipes	ORYLA05482		ENSORLG00000005150
			E	Oryzias melastigma	ORYME23579		A0A3B3C559
			E	Nothobranchius furzeri	NOTFU08504		A0A9D2YS95
			E	Kryptolebias marmoratus	KRYMA06064		A0A3Q3BA79
			E	Cyprinodon variegatus	CYPVA06716		A0A3Q2GF68
			E	Gambusia affinis	GAMAF13303		ENSGAFG00000000417.1
			E	Poecilia formosa	POEFO00014		A0A087YF68
			E	Poecilia reticulata	POERE11038		A0A3P9P3Y2
			E	Xiphophorus maculatus	XIPMA25936		A0A3B5QZW1

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