Pairwise Orthologs for HUMAN78105

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN78105 (NEK1_HUMAN)

E Homo sapiens | Serine/threonine-protein kinase Nek1 [NEK1]

‹

This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN78101.

Loading, please wait...

Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL18871		A0A9J7LD50
			E	Scyliorhinus torazame	SCYTO03846		A0A401PNV5
			E	Chiloscyllium punctatum	CHIPU18003		A0A401RLI7
			E	Callorhinchus milii	CALMI34402		A0A4W3JUM8
			E	Lepisosteus oculatus	LEPOC12689		W5MTR5
			E	Anguilla anguilla	ANGAN18179		XP_035269085
			E	Echeneis naucrates	ECHNA35017		A0A665T6I7
			E	Cynoglossus semilaevis	CYNSE20556		A0A3P8UHI4
			E	Dicentrarchus labrax	DICLA37974		A0A8P4KR05
			E	Gasterosteus aculeatus	GASAC12919		G3PLX9
			E	Takifugu rubripes	TAKRU27163		H2UH01
			E	Tetraodon nigroviridis	TETNG00563		H3C274
			E	Oryzias latipes	ORYLA12791		ENSORLG00000000439
			E	Oryzias melastigma	ORYME30000		A0A3B3DP96
			E	Nothobranchius furzeri	NOTFU30679		nek1
			E	Poecilia formosa	POEFO05044		A0A087YKR2
			E	Astatotilapia calliptera	ASTCA27573		A0A3P8N7C8
			E	Haplochromis burtoni	HAPBU09283		A0A3Q2VMR0
			E	Oreochromis aureus	OREAU02256		A0A668U5Z6
			E	Oreochromis niloticus	ORENI44401		I3J4T0
			E	Esox lucius	ESOLU24481		A0A6Q2Z8E3
			E	Astyanax mexicanus	ASTMX09946		ENSAMXG00000010924
			E	Pygocentrus nattereri	PYGNA09330		A0A3B4E092
			E	Ictalurus punctatus	ICTPU25788		ENSIPUG00000008652.1
			E	Latimeria chalumnae	LATCH06275		H3APE6

Showing 1 to 25 of 25 rows rows per page