Pairwise Orthologs for HUMAN70021

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN70021 (GPX1_HUMAN)

E Homo sapiens | Glutathione peroxidase 1 [GPX1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601)	ALIDK02840		Alide2_2985
			B	Herminiimonas arsenicoxydans	HERAR02788		HEAR2926
			B	Polaromonas sp. (strain JS666 / ATCC BAA-500)	POLSJ04562		Bpro_4659
			E	Branchiostoma floridae	BRAFL25069		A0A9J7N3Z9
			E	Branchiostoma lanceolatum	BRALA14527		A0A8J9YLI6
			E	Callorhinchus milii	CALMI11014		A0A4W3JXX9
			E	Lepisosteus oculatus	LEPOC13853		W5MXS6
			E	Anabas testudineus	ANATE03433		ENSATEG00000003931.1
			E	Echeneis naucrates	ECHNA05043		A0A665VVZ9
			E	Cynoglossus semilaevis	CYNSE03079		A0A3P8ULW3
			E	Scophthalmus maximus	SCOMX27609		A0A2U9BFT7
			E	Dicentrarchus labrax	DICLA22838		XP_051271169
			E	Gasterosteus aculeatus	GASAC02341		G3N766
			E	Sparus aurata	SPAAU40057		K9UQZ9
			E	Mola mola	MOLML03015		A0A3Q3XN19
			E	Tetraodon nigroviridis	TETNG02443		H3DAV4
			E	Oryzias javanicus	ORYJA02470		A0A3S2PGY0
			E	Oryzias latipes	ORYLA13707		ENSORLG00000000823
			E	Oryzias melastigma	ORYME00089		A0A3B3DDZ5
			E	Kryptolebias marmoratus	KRYMA10261		A0A3Q3BED9
			E	Cyprinodon variegatus	CYPVA17831		A0A3Q2C6F1
			E	Poecilia formosa	POEFO16533		A0A087XEZ3
			E	Poecilia reticulata	POERE27474		A0A3P9NXQ7
			E	Xiphophorus maculatus	XIPMA18680		M4APJ2
			E	Salarias fasciatus	SALFA36933		A0A672HSJ9

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