Pairwise Orthologs for HUMAN62877

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN62877 (ENSG00000082898.18)

E Homo sapiens

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN62859.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Entamoeba dispar (strain ATCC PRA-260 / SAW760)	ENTDS07205		B0EF19
			E	Entamoeba histolytica	ENTHI04406		A0A5K1UQL9
			E	Entamoeba histolytica (strain ATCC 30459 / HM-1:IMSS / ABRM)	ENTH103688		A0A5K1UQL9
			E	Entamoeba invadens IP1	ENTIV04037		A0A0A1U8N7
			E	Entamoeba nuttalli (strain P19)	ENTNP00378		K2HUV7
			E	Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500)	POLPP11636		D3BG39
			E	Dictyostelium discoideum	DICDI11271		XPO1_DICDI
			E	Dictyostelium purpureum	DICPU03570		F0ZGA1
			E	Tieghemostelium lacteum	TIELA04323		A0A151ZEN7
			E	Thecamonas trahens ATCC 50062	THETB06904		A0A0L0DGJ6
			E	Guillardia theta	GUITH04259		EKX34427
			E	Guillardia theta (strain CCMP2712)	GUITC21069		L1IEB2
			E	Bodo saltans	BODSA10514		A0A0S4J0P7
			E	Leishmania donovani (strain BPK282A1)	LEIDB01776		E9BNL9
			E	Leishmania infantum	LEIIN02171		A0A6L0XXV9
			E	Leishmania major strain Friedlin	LEIMA04928		Q4Q5H2
			E	Leishmania mexicana (strain MHOM/GT/2001/U1103)	LEIMU05271		E9B2N5
			E	Leishmania braziliensis	LEIBR01800		A4HK92
			E	Leptomonas pyrrhocoris	LEPPY02328		A0A0N0DYX7
			E	Leptomonas seymouri	LEPSE00088		A0A0N1IMX3
			E	Trypanosoma vivax (strain Y486)	TRYVY17552		ERJ75_001821800
			E	Trypanosoma rangeli	TRYRA00808		A0A3R7MUM9
			E	Trypanosoma cruzi (strain CL Brener)	TRYCC03416		Q4DWH6
			E	Naegleria gruberi strain NEG-M	NAEGR01582		D2V758
			E	Diacronema lutheri	DIALT04643		A0A8J6C5T6

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