Pairwise Orthologs for HUMAN62723

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN62723 (GRDN_HUMAN)

E Homo sapiens | Girdin [CCDC88A]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Fluviicola taffensis (strain DSM 16823 / NCIMB 13979 / RW262)	FLUTR03128		WP_013687914
			B	Mycoplasmopsis fermentans (strain JER)	MYCFJ00310		MFE_03450
			B	Xenorhabdus bovienii (strain SS-2004)	XENBS01727		WP_012988351
			E	Leishmania infantum	LEIIN04078		A4I2I6
			E	Trypanosoma vivax (strain Y486)	TRYVY02248		ERJ75_000244400
			E	Tuber melanosporum (strain Mel28)	TUBMM05185		D5GIM6
			E	Aureobasidium pullulans	AURPU05752		gm1.5174_g
			E	Aureobasidium subglaciale (strain EXF-2481)	AURSE05988		A0A074YAT6
			E	Candida albicans (strain SC5314 / ATCC MYA-2876)	CANAL01200		A0A1D8PFH4
			E	Saccharomyces cerevisiae (strain VIN 13)	YEASV03040		EGA76705
			E	Spizellomyces punctatus	SPIPN05945		SPPG_06265
			E	Spizellomyces punctatus (strain DAOM BR117)	SPIPD06731		A0A0L0HAL1
			E	Rozella allomycis (strain CSF55)	ROZAC00628		A0A075B364
			E	Rhizophagus irregularis (strain DAOM 197198w)	RHIIW04875		A0A015KCC2
			E	Eptatretus burgeri	EPTBU22974		A0A8C4QD57
			E	Scyliorhinus torazame	SCYTO03149		A0A401PLW6
			E	Chiloscyllium punctatum	CHIPU06798		A0A401SDC9
			E	Callorhinchus milii	CALMI14276		A0A4W3GQU8
			E	Lepisosteus oculatus	LEPOC05063		W5NEV4
			E	Anabas testudineus	ANATE09803		ENSATEG00000011266.1
			E	Seriola dumerili	SERDU19489		A0A3B4V5T6
			E	Echeneis naucrates	ECHNA11577		A0A665X594
			E	Cynoglossus semilaevis	CYNSE04412		A0A3P8UJS9
			E	Scophthalmus maximus	SCOMX07782		ENSSMAG00000018529.1
			E	Dicentrarchus labrax	DICLA03566		XP_051235397

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