Pairwise Orthologs for HUMAN59781

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN59781 (KREM1_HUMAN)

E Homo sapiens | Kremen protein 1 [KREMEN1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO11853		A0A401P066
			E	Chiloscyllium punctatum	CHIPU15118		A0A401T2C1
			E	Callorhinchus milii	CALMI24470		A0A4W3I859
			E	Lepisosteus oculatus	LEPOC08050		W5M5M9
			E	Anguilla anguilla	ANGAN35782		XP_035291535
			E	Anabas testudineus	ANATE12722		ENSATEG00000005565.1
			E	Seriola dumerili	SERDU25405		A0A3B4V258
			E	Echeneis naucrates	ECHNA20389		A0A665TF82
			E	Scophthalmus maximus	SCOMX33431		ENSSMAG00000012823.1
			E	Dicentrarchus labrax	DICLA30000		XP_051279855
			E	Gasterosteus aculeatus	GASAC14921		G3PP24
			E	Mola mola	MOLML12911		A0A3Q3VKE3
			E	Takifugu rubripes	TAKRU30586		H2UWD1
			E	Tetraodon nigroviridis	TETNG02959		H3DDV6
			E	Oryzias javanicus	ORYJA42082		A0A3S2MVD9
			E	Oryzias latipes	ORYLA17219		ENSORLG00000000299
			E	Oryzias melastigma	ORYME31683		A0A3B3DD75
			E	Nothobranchius furzeri	NOTFU17580		A0A9D2XNS2
			E	Kryptolebias marmoratus	KRYMA18609		A0A3Q2ZGI4
			E	Cyprinodon variegatus	CYPVA16155		A0A3Q2D7I8
			E	Gambusia affinis	GAMAF21992		ENSGAFG00000006630.1
			E	Poecilia formosa	POEFO03681		A0A087Y8V4
			E	Poecilia reticulata	POERE33156		A0A3P9N9K4
			E	Xiphophorus maculatus	XIPMA03873		M3ZKD7
			E	Astatotilapia calliptera	ASTCA06328		A0A3P8QZJ1

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