Pairwise Orthologs for HUMAN55559

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN55559 (Q96P20)

E Homo sapiens | NACHT, LRR and PYD domains-containing protein 3 | NLR family pyrin domain containing 3 [NLRP3]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO12009		A0A401P3J9
			E	Lepisosteus oculatus	LEPOC11275		W5MMQ8
			E	Anguilla anguilla	ANGAN56995		XP_035257506
			E	Cynoglossus semilaevis	CYNSE28538		A0A3P8UW89
			E	Dicentrarchus labrax	DICLA53605		A0A8C4DYT1
			E	Salarias fasciatus	SALFA15077		A0A672HUM3
			E	Haplochromis burtoni	HAPBU32033		A0A3Q3BI22
			E	Oreochromis aureus	OREAU50030		A0A668VNN1
			E	Astyanax mexicanus	ASTMX13379		ENSAMXG00000004211
			E	Pygocentrus nattereri	PYGNA35193		A0A3B4DE59
			E	Ornithorhynchus anatinus	ORNAN00955		F6R6M1
			E	Tachyglossus aculeatus	TACAU11768		XP_038608619
			E	Loxodonta africana	LOXAF02990		G3SMV5
			E	Echinops telfairi	ECHTE11102		ENSETEG00000015753
			E	Oryctolagus cuniculus	RABIT17350		G1SNY9
			E	Dipodomys ordii	DIPOR05475		ENSDORG00000010673.2
			E	Fukomys damarensis	FUKDA21404		ENSFDAG00000012003.1
			E	Cavia aperea	CAVAP00434		ENSCAPG00000002466.1
			E	Cavia porcellus	CAVPO00587		H0WCD9
			E	Chinchilla lanigera	CHILA24728		A0A8C2UJ49
			E	Octodon degus	OCTDE26238		ENSODEG00000001033.1
			E	Jaculus jaculus	JACJA08718		A0A8C5NW00
			E	Cricetulus griseus	CRIGR11237		ENSCGRG00000016221.1
			E	Mus musculus	MOUSE03451		NLRP3_MOUSE
			E	Rattus norvegicus	RATNO00255		NLRP3_RAT

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