Pairwise Orthologs for HUMAN53614

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN53614 (CENPL_HUMAN)

E Homo sapiens | Centromere protein L [CENPL]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN53615.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Acanthamoeba castellanii str. Neff	ACACA10855		L8GPM5
			E	Petromyzon marinus	PETMA01511		S4R9U5
			E	Eptatretus burgeri	EPTBU00392		A0A8C4X2A8
			E	Scyliorhinus torazame	SCYTO05136		A0A401P3L4
			E	Chiloscyllium punctatum	CHIPU08809		A0A401SJ54
			E	Callorhinchus milii	CALMI30698		V9KYT9
			E	Lepisosteus oculatus	LEPOC01643		W5MS61
			E	Anguilla anguilla	ANGAN22678		XP_035279937
			E	Anabas testudineus	ANATE00618		ENSATEG00000002427.1
			E	Seriola dumerili	SERDU19137		A0A3B4UDP7
			E	Echeneis naucrates	ECHNA17757		A0A665UE86
			E	Cynoglossus semilaevis	CYNSE07952		A0A3P8VWV8
			E	Scophthalmus maximus	SCOMX15131		ENSSMAG00000005546.1
			E	Dicentrarchus labrax	DICLA34551		XP_051284119
			E	Gasterosteus aculeatus	GASAC20340		G3PQI2
			E	Sparus aurata	SPAAU66690		A0A671YVK9
			E	Mola mola	MOLML22498		A0A3Q3W4H7
			E	Takifugu rubripes	TAKRU47997		H2TXD4
			E	Tetraodon nigroviridis	TETNG09668		H3DAM5
			E	Oryzias javanicus	ORYJA16570		A0A3S2MGF1
			E	Oryzias latipes	ORYLA08734		ENSORLG00000004817
			E	Oryzias melastigma	ORYME29454		A0A3B3BHQ5
			E	Nothobranchius furzeri	NOTFU11225		A0A1A8UZ18
			E	Kryptolebias marmoratus	KRYMA26315		A0A3Q3AEN7
			E	Cyprinodon variegatus	CYPVA19500		A0A3Q2EHF6

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