Pairwise Orthologs for HUMAN52738

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN52738 (A0A087X0W3)

E Homo sapiens | Glycosylated lysosomal membrane protein [GLMP]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN52737.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR507362		F2UJ04
			E	Capsaspora owczarzaki (strain ATCC 30864)	CAPO303727		A0A0D2X4U4
			E	Branchiostoma floridae	BRAFL05223		A0A9J7KQ52
			E	Branchiostoma lanceolatum	BRALA21730		BL18714
			E	Petromyzon marinus	PETMA03804		S4RRF3
			E	Eptatretus burgeri	EPTBU11397		A0A8C4PVY9
			E	Chiloscyllium punctatum	CHIPU17862		A0A401RKF2
			E	Lepisosteus oculatus	LEPOC09632		W5MK22
			E	Anguilla anguilla	ANGAN31083		XP_035286593
			E	Anabas testudineus	ANATE04397		ENSATEG00000010627.1
			E	Seriola dumerili	SERDU08949		A0A3B4T2K0
			E	Echeneis naucrates	ECHNA18740		A0A665TK15
			E	Cynoglossus semilaevis	CYNSE13361		A0A3P8WSN0
			E	Scophthalmus maximus	SCOMX19119		ENSSMAG00000015177.1
			E	Dicentrarchus labrax	DICLA49057		XP_051246870
			E	Gasterosteus aculeatus	GASAC06008		G3P6T1
			E	Sparus aurata	SPAAU08940		A0A671UIY0
			E	Mola mola	MOLML27423		A0A3Q4BQA6
			E	Takifugu rubripes	TAKRU06881		H2RM90
			E	Tetraodon nigroviridis	TETNG15435		H3CG98
			E	Oryzias javanicus	ORYJA36300		A0A437CWW4
			E	Oryzias latipes	ORYLA01636		ENSORLG00000001614
			E	Oryzias melastigma	ORYME30877		A0A3B3BTM7
			E	Nothobranchius furzeri	NOTFU28332		A0A1A8V0N8
			E	Kryptolebias marmoratus	KRYMA19969		A0A3Q2ZEJ6

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