Pairwise Orthologs for HUMAN52562

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN52562 (RUSC1_HUMAN)

E Homo sapiens | AP-4 complex accessory subunit RUSC1 [RUSC1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Anabas testudineus	ANATE08033		ENSATEG00000023641.1
			E	Gambusia affinis	GAMAF18711		ENSGAFG00000014750.1
			E	Tachyglossus aculeatus	TACAU27530		XP_038624874
			E	Echinops telfairi	ECHTE15272		ENSETEG00000001156
			E	Cavia porcellus	CAVPO06487		A0A286XBJ9
			E	Chinchilla lanigera	CHILA23339		A0A8C2UZ89
			E	Cricetulus griseus	CRIGR08924		ENSCGRG00000010823.1
			E	Mus musculus	MOUSE38493		RUSC1_MOUSE
			E	Ictidomys tridecemlineatus	ICTTR01390		ENSSTOG00000004516
			E	Cercocebus atys	CERAT41702		A0A2K5LCG5
			E	Chlorocebus sabaeus	CHLSB08344		A0A0D9S573
			E	Macaca fascicularis	MACFA21007		ENSMFAG00000042892.1
			E	Macaca mulatta	MACMU21382		A0A5F7ZWS8
			E	Macaca nemestrina	MACNE23405		A0A2K6CYC2
			E	Mandrillus leucophaeus	MANLE31737		A0A2K5Y681
			E	Papio anubis	PAPAN17877		A0A8I5NVZ6
			E	Colobus angolensis palliatus	COLAP25555		A0A2K5HDW1
			E	Rhinopithecus roxellana	RHIRO41372		A0A2K6QLF8
			E	Gorilla gorilla gorilla	GORGO20445		G3RQG9
			E	Pan paniscus	PANPA02668		A0A2R9AED5
			E	Pan troglodytes	PANTR22508		A0A6D2W8V5
			E	Pongo abelii	PONAB17632		H2N5H0
			E	Nomascus leucogenys	NOMLE05802		A0A2I3HL71
			E	Aotus nancymaae	AOTNA24880		A0A2K5DHH1
			E	Callithrix jacchus	CALJA16748		U3EZT5

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