Pairwise Orthologs for HUMAN50555

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN50555 (KAPCB_HUMAN)

E Homo sapiens | cAMP-dependent protein kinase catalytic subunit be [PRKACB]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Deltaproteobacteria bacterium NC_groundwater_1655_Pr3_B-0.1um_70_22	U11DE00090		HY903_06645
			E	Schizosaccharomyces octosporus (strain yFS286)	SCHOY00039		S9RHB1
			E	Trichophyton rubrum (strain ATCC MYA-4607 / CBS 118892)	TRIRC09682		F2SZ98
			E	Scyliorhinus torazame	SCYTO05575		A0A401PAZ0
			E	Chiloscyllium punctatum	CHIPU16538		A0A401T6B5
			E	Callorhinchus milii	CALMI05942		A0A4W3HNN8
			E	Scophthalmus maximus	SCOMX28995		ENSSMAG00000020010.1
			E	Dicentrarchus labrax	DICLA01366		XP_051258388
			E	Gasterosteus aculeatus	GASAC09550		G3Q131
			E	Sparus aurata	SPAAU37881		A0A671XXG6
			E	Mola mola	MOLML19457		A0A3Q3WUP3
			E	Takifugu rubripes	TAKRU33028		A0A674MQT1
			E	Tetraodon nigroviridis	TETNG14147		H3CSX4
			E	Oryzias javanicus	ORYJA27929		ENSOJAG00000015217.1
			E	Oryzias melastigma	ORYME25336		A0A3B3BGW9
			E	Salarias fasciatus	SALFA34016		A0A672I3R2
			E	Astatotilapia calliptera	ASTCA16085		A0A3P8QJ11
			E	Haplochromis burtoni	HAPBU00229		A0A3Q2WI14
			E	Neolamprologus brichardi	NEOBR06421		A0A3Q4H2N6
			E	Oreochromis aureus	OREAU17569		A0A668VGV6
			E	Oreochromis niloticus	ORENI28000		A0A669E8E5
			E	Amphilophus citrinellus	AMPCI03071		A0A3Q0SJA4
			E	Amphiprion ocellaris	AMPOC13244		A0A3Q1AMM2
			E	Amphiprion percula	AMPPE00819		A0A3P8RZJ9
			E	Gadus morhua	GADMO57453		A0A8C5A0K4

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