Pairwise Orthologs for HUMAN47101

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN47101 (Q96P72)

E Homo sapiens | DFFB protein | DNA fragmentation factor subunit beta [DFFB]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN47104.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL33079		A0A9J7NBV2
			E	Branchiostoma lanceolatum	BRALA14362		BL05950
			E	Petromyzon marinus	PETMA08953		S4R4Y8
			E	Eptatretus burgeri	EPTBU17004		A0A8C4WYT8
			E	Scyliorhinus torazame	SCYTO17526		A0A401PZZ9
			E	Chiloscyllium punctatum	CHIPU09086		A0A401SJZ4
			E	Callorhinchus milii	CALMI22574		A0A4W3GN28
			E	Lepisosteus oculatus	LEPOC09954		W5MFN3
			E	Anguilla anguilla	ANGAN38652		XP_035237186
			E	Anabas testudineus	ANATE20121		ENSATEG00000006039.1
			E	Seriola dumerili	SERDU28004		A0A3B4UQY8
			E	Echeneis naucrates	ECHNA00017		A0A665SU36
			E	Cynoglossus semilaevis	CYNSE01944		A0A3P8V937
			E	Scophthalmus maximus	SCOMX02009		A0A2U9BYV1
			E	Dicentrarchus labrax	DICLA32927		A0A8C4E3Y5
			E	Gasterosteus aculeatus	GASAC11421		G3NPN2
			E	Sparus aurata	SPAAU50699		A0A671TZF4
			E	Mola mola	MOLML17497		A0A3Q3X9Y4
			E	Tetraodon nigroviridis	TETNG14721		H3C5P7
			E	Oryzias javanicus	ORYJA19123		A0A3S2MZ49
			E	Oryzias melastigma	ORYME04691		A0A3B3CCN6
			E	Nothobranchius furzeri	NOTFU23405		A0A1A7ZUX4
			E	Kryptolebias marmoratus	KRYMA07048		A0A3Q2ZNK3
			E	Cyprinodon variegatus	CYPVA11422		A0A3Q2CW62
			E	Gambusia affinis	GAMAF27208		A0A315WBV3

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