Pairwise Orthologs for HUMAN46842

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN46842 (CCNL2_HUMAN)

E Homo sapiens | Cyclin-L2 [CCNL2]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Guillardia theta	GUITH02845		EKX33202
			E	Guillardia theta (strain CCMP2712)	GUITC22465		L1IAS5
			E	Tuber melanosporum (strain Mel28)	TUBMM00687		D5G5S6
			E	Botryosphaeria parva (strain UCR-NP2)	BOTPV02560		R1GRN5
			E	Alternaria alternata	ALTAL07308		A0A177DJJ0
			E	Uncinula necator	UNCNE01661		A0A0B1PJ08
			E	Metarhizium acridum (strain CQMa 102)	METAQ03773		E9E1M5
			E	Beauveria bassiana	BEABA01052		A0A2N6P286
			E	Purpureocillium lilacinum	PURLI00717		A0A179HY27
			E	Stachybotrys chlorohalonata (strain IBT 40285)	STAC400624		A0A084R2U0
			E	Pseudallescheria apiosperma	PSEDA01187		A0A084GB37
			E	Rosellinia necatrix	ROSNE11317		A0A1W2TUW3
			E	Serendipita indica (strain DSM 11827)	SERID01518		G4T8M9
			E	Creolimax fragrantissima	CREFR01970		CFRG1970
			E	Scyliorhinus torazame	SCYTO16102		A0A401Q5N7
			E	Chiloscyllium punctatum	CHIPU16089		A0A401T4X8
			E	Anguilla anguilla	ANGAN45755		XP_035244433
			E	Latimeria chalumnae	LATCH20287		H3BHZ3
			E	Ornithorhynchus anatinus	ORNAN22067		A0A6I8P905
			E	Tachyglossus aculeatus	TACAU06472		XP_038602642
			E	Loxodonta africana	LOXAF11508		G3TNS4
			E	Oryctolagus cuniculus	RABIT18814		ENSOCUG00000017589.3
			E	Ochotona princeps	OCHPR00325		ENSOPRG00000008401
			E	Dipodomys ordii	DIPOR05823		ENSDORG00000019842.2
			E	Cavia aperea	CAVAP17945		ENSCAPG00000014547.1

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