Pairwise Orthologs for HUMAN45388

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN45388 (KLK3_HUMAN)

E Homo sapiens | Prostate-specific antigen [KLK3]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Cercocebus atys	CERAT28692		A0A2K5NRV6
			E	Macaca fascicularis	MACFA18885		ENSMFAG00000039853.1
			E	Macaca mulatta	MACMU19623		KLK3_MACMU
			E	Macaca nemestrina	MACNE21526		A0A2K6DE01
			E	Mandrillus leucophaeus	MANLE19983		A0A2K5XY86
			E	Papio anubis	PAPAN22901		A9UC60
			E	Colobus angolensis palliatus	COLAP22690		A0A2K5K4W5
			E	Rhinopithecus bieti	RHIBE37011		A0A2K6KXW2
			E	Rhinopithecus roxellana	RHIRO19513		A0A2K6QPI5
			E	Gorilla gorilla gorilla	GORGO15128		G3RTM4
			E	Pan paniscus	PANPA21163		A0A2R8ZQ69
			E	Pan troglodytes	PANTR19055		A0A2I3RPU8
			E	Pongo abelii	PONAB14581		H2NZT7
			E	Nomascus leucogenys	NOMLE01016		G1R1A8
			E	Canis lupus familiaris	CANLF00751		ENSCAFG00000002907
			E	Chelonoidis abingdonii	CHEAB25302		A0A8C0J9I4
			E	Anopheles gambiae	ANOGA14171		A0NAI2
			B	Denitrovibrio acetiphilus (strain DSM 12809 / NBRC 114555 / N2460)	DENA201875		WP_013011247
			B	Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1)	METEA01207		MexAM1_META1p1316
			B	Methylorubrum extorquens (strain CM4 / NCIMB 13688)	METC401584		Mchl_1703
			B	Methylorubrum extorquens (strain DSM 6343 / CIP 106787 / DM4)	METED01946		METDI2088
			B	Methylorubrum extorquens (strain PA1)	METEP01396		Mext_1429
			B	Methylobacterium nodulans (strain LMG 21967 / CNCM I-2342 / ORS 2060)	METNO03901		Mnod_4174
			B	Methylorubrum populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)	METPB01385		WP_012453340
			B	Methylocella silvestris (strain DSM 15510 / CIP 108128 / LMG 27833 / NCIMB 13906 / BL2)	METSB00420		WP_012589476

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