Pairwise Orthologs for HUMAN43811

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN43811 (CEAM6_HUMAN)

E Homo sapiens | Carcinoembryonic antigen-related cell adhesion mol [CEACAM6]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Seriola dumerili	SERDU31495		A0A3B4T417
			E	Scophthalmus maximus	SCOMX15856		ENSSMAG00000008779.1
			E	Tetraodon nigroviridis	TETNG07289		H3BXM2
			E	Oryzias javanicus	ORYJA38427		ENSOJAG00000013869.1
			E	Salarias fasciatus	SALFA32200		A0A672J3U5
			E	Cyprinus carpio carpio	CYPCA27175		A0A9J7YNE7
			E	Ornithorhynchus anatinus	ORNAN22478		F7AMC7
			E	Cavia aperea	CAVAP14876		ENSCAPG00000017579.1
			E	Rattus norvegicus	RATNO16853		B3Y574
			E	Cercocebus atys	CERAT40221		A0A2K5KQK8
			E	Chlorocebus sabaeus	CHLSB15810		A0A0D9S0Z6
			E	Macaca fascicularis	MACFA18330		ENSMFAG00000002981.1
			E	Macaca mulatta	MACMU19070		A0A1D5R7Z4
			E	Macaca nemestrina	MACNE25917		A0A2K6BR89
			E	Mandrillus leucophaeus	MANLE18884		A0A2K5Y9Y4
			E	Papio anubis	PAPAN22419		A0A2I3MLV8
			E	Colobus angolensis palliatus	COLAP24679		A0A2K5IRN7
			E	Rhinopithecus bieti	RHIBE39300		A0A2K6L7R4
			E	Rhinopithecus roxellana	RHIRO11222		A0A2K6R6S1
			E	Gorilla gorilla gorilla	GORGO16248		G3RU01
			E	Pan paniscus	PANPA20583		A0A2R9B8F4
			E	Pan troglodytes	PANTR18390		A0A2I3TN57
			E	Pongo abelii	PONAB14147		H2NYY6
			E	Nomascus leucogenys	NOMLE13266		A0A2I3GBN1
			E	Cebus imitator	CEBIM28560		A0A2K5SJF2

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