Pairwise Orthologs for HUMAN43583

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN43583 (SPTN4_HUMAN)

E Homo sapiens | Spectrin beta chain, non-erythrocytic 4 [SPTBN4]

‹

This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN43585.

Loading, please wait...

Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Lepisosteus oculatus	LEPOC07839		W5NBC1
			E	Anguilla anguilla	ANGAN41068		XP_035240585
			E	Anabas testudineus	ANATE18304		ENSATEG00000006069.1
			E	Seriola dumerili	SERDU16698		A0A3B4T9X6
			E	Cynoglossus semilaevis	CYNSE22535		A0A3P8V3Z0
			E	Scophthalmus maximus	SCOMX21886		ENSSMAG00000019985.1
			E	Dicentrarchus labrax	DICLA08456		XP_051254463
			E	Gasterosteus aculeatus	GASAC19973		G3PG61
			E	Sparus aurata	SPAAU16576		A0A671URU8
			E	Mola mola	MOLML07802		A0A3Q4AQ61
			E	Takifugu rubripes	TAKRU04469		H2SCG6
			E	Tetraodon nigroviridis	TETNG05832		H3DNS4
			E	Oryzias latipes	ORYLA03088		ENSORLG00000001689
			E	Kryptolebias marmoratus	KRYMA24680		A0A3Q3BGL2
			E	Gambusia affinis	GAMAF31256		ENSGAFG00000002958.1
			E	Poecilia formosa	POEFO06303		A0A087YFW7
			E	Poecilia reticulata	POERE07021		A0A3P9Q279
			E	Xiphophorus maculatus	XIPMA13405		M3ZV24
			E	Astatotilapia calliptera	ASTCA08465		A0A3P8QAL8
			E	Haplochromis burtoni	HAPBU16821		A0A3Q2W975
			E	Oreochromis niloticus	ORENI17122		A0A669CD96
			E	Amphilophus citrinellus	AMPCI16363		A0A3Q0RHC4
			E	Amphiprion percula	AMPPE31698		A0A3P8TEJ4
			E	Esox lucius	ESOLU01297		A0A3P8Y892
			E	Salmo salar	SALSA142500		ENSSSAG00000050910.2

Showing 1 to 25 of 25 rows rows per page