Pairwise Orthologs for HUMAN43234

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN43234 (RYR1_HUMAN)

E Homo sapiens | Ryanodine receptor 1 [RYR1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO05972		A0A401PEZ4
			E	Chiloscyllium punctatum	CHIPU14820		A0A401T1B4
			E	Callorhinchus milii	CALMI43482		A0A4W3I1N0
			E	Lepisosteus oculatus	LEPOC07771		W5NAB3
			E	Anguilla anguilla	ANGAN34525		XP_035290619
			E	Anabas testudineus	ANATE18361		ENSATEG00000008379.1
			E	Echeneis naucrates	ECHNA06706		A0A665UMP0
			E	Cynoglossus semilaevis	CYNSE22492		A0A3P8V8N2
			E	Sparus aurata	SPAAU18012		A0A671X656
			E	Mola mola	MOLML07762		A0A3Q3W3J2
			E	Cyprinodon variegatus	CYPVA13476		A0A3Q2FVU3
			E	Gambusia affinis	GAMAF04501		ENSGAFG00000002077.1
			E	Poecilia reticulata	POERE07618		A0A3P9Q456
			E	Xiphophorus maculatus	XIPMA13284		M3ZS96
			E	Salarias fasciatus	SALFA47620		A0A672IZ60
			E	Astatotilapia calliptera	ASTCA08534		A0A3P8QNI5
			E	Haplochromis burtoni	HAPBU20275		A0A3Q3BXN4
			E	Neolamprologus brichardi	NEOBR16661		A0A3Q4GHR2
			E	Oreochromis aureus	OREAU49918		A0A668VIX6
			E	Oreochromis niloticus	ORENI16996		I3J7R3
			E	Esox lucius	ESOLU02977		A0A3P9AI44
			E	Astyanax mexicanus	ASTMX12146		ENSAMXG00000008578
			E	Sinocyclocheilus grahami	SINGR16036		A0A672NZF4
			E	Latimeria chalumnae	LATCH19162		H3BGR5
			E	Ornithorhynchus anatinus	ORNAN22952		A0A6I8PHX0

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