Pairwise Orthologs for HUMAN42634

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN42634 (F187B_HUMAN)

E Homo sapiens | Protein FAM187B [FAM187B]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO17200		A0A401PT52
			E	Chiloscyllium punctatum	CHIPU19720		A0A401RTH7
			E	Lepisosteus oculatus	LEPOC09511		W5MD05
			E	Latimeria chalumnae	LATCH02195		H3A3M0
			E	Tachyglossus aculeatus	TACAU25567		XP_038623548
			E	Procavia capensis	PROCA08770		ENSPCAG00000013856
			E	Loxodonta africana	LOXAF03432		G3SP29
			E	Echinops telfairi	ECHTE02014		ENSETEG00000013028
			E	Oryctolagus cuniculus	RABIT16058		ENSOCUG00000007131.2
			E	Ochotona princeps	OCHPR00069		ENSOPRG00000007017
			E	Fukomys damarensis	FUKDA22114		ENSFDAG00000007794.1
			E	Cavia aperea	CAVAP13054		ENSCAPG00000012582.1
			E	Cavia porcellus	CAVPO17787		H0WDY1
			E	Chinchilla lanigera	CHILA16521		A0A8C2VRQ8
			E	Jaculus jaculus	JACJA11346		A0A8C5KPK0
			E	Mus musculus	MOUSE56035		F187B_MOUSE
			E	Rattus norvegicus	RATNO19049		M0RAW1
			E	Nannospalax galili	NANGA23141		A0A8C6QNH6
			E	Ictidomys tridecemlineatus	ICTTR10234		ENSSTOG00000027316
			E	Cercocebus atys	CERAT31009		A0A2K5MSD8
			E	Chlorocebus sabaeus	CHLSB15619		A0A0D9QWX2
			E	Macaca fascicularis	MACFA17945		F187B_MACFA
			E	Macaca mulatta	MACMU18528		A0A8J8YF02
			E	Macaca nemestrina	MACNE26336		A0A2K6EA76
			E	Mandrillus leucophaeus	MANLE25763		A0A2K5Y5T1

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