Pairwise Orthologs for HUMAN42200

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN42200 (ZN101_HUMAN)

E Homo sapiens | Zinc finger protein 101 [ZNF101]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Cercocebus atys	CERAT22178	1:1	A0A2K5L0K9
			E	Chlorocebus sabaeus	CHLSB15526	1:1	A0A0D9QYD1
			E	Macaca fascicularis	MACFA17738	1:1	ENSMFAG00000042473.1
			E	Macaca mulatta	MACMU00166	1:1	F6ZCX9
			E	Macaca nemestrina	MACNE11672	1:1	A0A2K6CG41
			E	Mandrillus leucophaeus	MANLE13498	1:1	A0A2K5ZLQ2
			E	Colobus angolensis palliatus	COLAP29818	1:1	A0A2K5JFU5
			E	Rhinopithecus bieti	RHIBE31490	1:1	A0A2K6KHY8
			E	Rhinopithecus roxellana	RHIRO21806	1:1	A0A2K6PYI4
			E	Gorilla gorilla gorilla	GORGO16447	1:1	G3RLR3
			E	Pan paniscus	PANPA19994	1:1	A0A2R9A264
			E	Pan troglodytes	PANTR17734	1:1	A0A6D2W8D6
			E	Pongo abelii	PONAB14357	1:1	A0A6D2XW66
			E	Nomascus leucogenys	NOMLE00769	1:1	A0A2I3GQ18
			E	Callithrix jacchus	CALJA22928	1:1	H9KW84
			E	Cebus imitator	CEBIM22525	1:1	A0A2K5RL05
			E	Saimiri boliviensis boliviensis	SAIBB36368	1:1	A0A2K6UU16
			E	Carlito syrichta	CARSF24652	1:1	ENSTSYG00000036034.1
			E	Aotus nancymaae	AOTNA12288	1:n	A0A2K5D9D5
			E	Aotus nancymaae	AOTNA31442	1:n	A0A2K5BUD5
			E	Haemonchus placei	HAEPC13130		A0A0N4WP67
			E	Ixodes persulcatus	IXOPE28305		HPB47_013094
			E	Ciona intestinalis	CIOIN16096		H2Y260

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