Pairwise Orthologs for HUMAN41724

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN41724 (OCEL1_HUMAN)

E Homo sapiens | Occludin/ELL domain-containing protein 1 [OCEL1]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Procavia capensis	PROCA13885		ENSPCAG00000009730
			E	Loxodonta africana	LOXAF11614		G3TQ96
			E	Fukomys damarensis	FUKDA19913		ENSFDAG00000020498.1
			E	Cavia porcellus	CAVPO20840		H0V965
			E	Chinchilla lanigera	CHILA22244		A0A8C2V949
			E	Octodon degus	OCTDE25831		ENSODEG00000002226.1
			E	Mus musculus	MOUSE60393		G5E815
			E	Rattus norvegicus	RATNO10729		B5DFM2
			E	Nannospalax galili	NANGA14282		A0A8C6QZ85
			E	Cercocebus atys	CERAT21993		A0A2K5P018
			E	Chlorocebus sabaeus	CHLSB15446		A0A0D9R024
			E	Macaca fascicularis	MACFA17557		ENSMFAG00000044199.1
			E	Macaca mulatta	MACMU19358		F7HKT4
			E	Papio anubis	PAPAN21986		A0A8I5MUK7
			E	Rhinopithecus bieti	RHIBE02600		A0A2K6K2V7
			E	Rhinopithecus roxellana	RHIRO03025		A0A2K6P6A0
			E	Gorilla gorilla gorilla	GORGO17223		G3R5W8
			E	Pan paniscus	PANPA19831		A0A2R9AKJ9
			E	Pan troglodytes	PANTR17546		A0A6D2VYT3
			E	Pongo abelii	PONAB14115		K7EUD8
			E	Nomascus leucogenys	NOMLE01649		G1R108
			E	Aotus nancymaae	AOTNA31280		A0A2K5C2K7
			E	Callithrix jacchus	CALJA23729		F7IEP3
			E	Cebus imitator	CEBIM22613		A0A2K5SHI0
			E	Propithecus coquereli	PROCO26661		A0A2K6FR04

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