Pairwise Orthologs for HUMAN33337

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN33337 (PPR1B_HUMAN)

E Homo sapiens | Protein phosphatase 1 regulatory subunit 1B [PPP1R1B]

‹

This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN33336.

Loading, please wait...

Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Anguilla anguilla	ANGAN07244		XP_035255120
			E	Anabas testudineus	ANATE28308		A0A7N6B6P4
			E	Seriola dumerili	SERDU13374		A0A3B4VPX1
			E	Echeneis naucrates	ECHNA47667		A0A665TB69
			E	Cynoglossus semilaevis	CYNSE12528		A0A3P8WGM7
			E	Gasterosteus aculeatus	GASAC03398		G3NRJ8
			E	Mola mola	MOLML26176		A0A3Q3XQD4
			E	Takifugu rubripes	TAKRU41697		A0A3B5KG64
			E	Oryzias latipes	ORYLA16445		ENSORLG00000003438
			E	Nothobranchius furzeri	NOTFU08304		A0A9D3BZM9
			E	Cyprinodon variegatus	CYPVA02231		A0A3Q2E908
			E	Astatotilapia calliptera	ASTCA29827		A0A3P8NDK7
			E	Haplochromis burtoni	HAPBU06254		A0A3Q2WUS5
			E	Amphiprion percula	AMPPE10971		A0A3P8S0H9
			E	Esox lucius	ESOLU30907		A0A3P9AAS3
			E	Salmo trutta	SALTR93721		A0A674CB21
			E	Astyanax mexicanus	ASTMX15370		A0A3B1KH30
			E	Pygocentrus nattereri	PYGNA27871		A0A3B4BPI2
			E	Electrophorus electricus	ELEEL30672		A0A4W4HL13
			E	Ictalurus punctatus	ICTPU19658		ENSIPUG00000012103.1
			E	Sinocyclocheilus grahami	SINGR87265		A0A672MC25
			E	Danio rerio	DANRE16095		E7F7T1
			E	Ornithorhynchus anatinus	ORNAN02129		A0A6I8NGU3
			E	Tachyglossus aculeatus	TACAU12558		XP_038609958
			E	Loxodonta africana	LOXAF10074		G3TG76

Showing 1 to 25 of 25 rows rows per page