Pairwise Orthologs for HUMAN31071

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN31071 (SCIMP_HUMAN)

E Homo sapiens | SLP adapter and CSK-interacting membrane protein [SCIMP]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN31070.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Tachyglossus aculeatus	TACAU19308		XP_038615749
			E	Echinops telfairi	ECHTE03618		ENSETEG00000011980
			E	Oryctolagus cuniculus	RABIT07264		ENSOCUG00000025793.2
			E	Ochotona princeps	OCHPR12045		ENSOPRG00000013070
			E	Dipodomys ordii	DIPOR08608		ENSDORG00000028534.1
			E	Fukomys damarensis	FUKDA19673		ENSFDAG00000008097.1
			E	Heterocephalus glaber	HETGA11598		A0A0P6J2K3
			E	Cavia porcellus	CAVPO18244		A0A286XCA9
			E	Chinchilla lanigera	CHILA16293		A0A8C2YR29
			E	Octodon degus	OCTDE16966		A0A6P6F3B5
			E	Jaculus jaculus	JACJA18684		A0A8C5KAJ6
			E	Cricetulus griseus	CRIGR03126		A0A3L7GM71
			E	Mus musculus	MOUSE06842		SCIMP_MOUSE
			E	Rattus norvegicus	RATNO00363		F1LYV1
			E	Nannospalax galili	NANGA01957		A0A8C6W811
			E	Ictidomys tridecemlineatus	ICTTR01215		ENSSTOG00000001058
			E	Cercocebus atys	CERAT17085		A0A2K5NFV2
			E	Chlorocebus sabaeus	CHLSB05141		A0A0D9RK76
			E	Macaca fascicularis	MACFA12776		ENSMFAG00000044584.1
			E	Macaca mulatta	MACMU15154		A0A5F7ZRP6
			E	Macaca nemestrina	MACNE31883		A0A2K6C5S1
			E	Mandrillus leucophaeus	MANLE14908		A0A2K5Z3I0
			E	Papio anubis	PAPAN13495		A0A2I3LFL4
			E	Colobus angolensis palliatus	COLAP23360		A0A2K5IZQ2
			E	Rhinopithecus bieti	RHIBE10316		A0A2K6JYD6

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