Pairwise Orthologs for HUMAN30968

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN30968 (CXL16_HUMAN)

E Homo sapiens | C-X-C motif chemokine 16 [CXCL16]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Ornithorhynchus anatinus	ORNAN31442		F6QWA8
			E	Tachyglossus aculeatus	TACAU26934		XP_038624591
			E	Procavia capensis	PROCA02474		ENSPCAG00000016394
			E	Loxodonta africana	LOXAF07907		G3UFV0
			E	Echinops telfairi	ECHTE03420		ENSETEG00000008857
			E	Oryctolagus cuniculus	RABIT07244		ENSOCUG00000027827.1
			E	Ochotona princeps	OCHPR03553		ENSOPRG00000012798
			E	Dipodomys ordii	DIPOR08646		ENSDORG00000028122.1
			E	Cavia porcellus	CAVPO18425		A0A286XY48
			E	Chinchilla lanigera	CHILA16257		A0A8C2VB73
			E	Jaculus jaculus	JACJA18715		A0A8C5KFK9
			E	Cricetulus griseus	CRIGR03100		ENSCGRG00000014202.1
			E	Mus musculus	MOUSE06476		CXL16_MOUSE
			E	Rattus norvegicus	RATNO00282		CXL16_RAT
			E	Nannospalax galili	NANGA01932		A0A8C6QCJ6
			E	Ictidomys tridecemlineatus	ICTTR01237		I3MDD2
			E	Cercocebus atys	CERAT17139		A0A2K5MXA0
			E	Chlorocebus sabaeus	CHLSB05118		A0A0D9RKX2
			E	Macaca fascicularis	MACFA12730		ENSMFAG00000031064.1
			E	Macaca mulatta	MACMU13760		F7AGQ0
			E	Macaca nemestrina	MACNE31827		A0A2K6DNQ3
			E	Mandrillus leucophaeus	MANLE29574		A0A2K5YLT4
			E	Papio anubis	PAPAN13244		A0A8I5R239
			E	Colobus angolensis palliatus	COLAP23316		A0A2K5JQF5
			E	Rhinopithecus bieti	RHIBE18187		A0A2K6KVQ0

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