Pairwise Orthologs for HUMAN29312

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN29312 (ENSG00000039068.19)

E Homo sapiens

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Ornithorhynchus anatinus	ORNAN03463		A0A6I8NIF7
			E	Tachyglossus aculeatus	TACAU13384		XP_038609613
			E	Procavia capensis	PROCA09359		ENSPCAG00000001549
			E	Loxodonta africana	LOXAF07407		G3THF8
			E	Echinops telfairi	ECHTE11974		ENSETEG00000018149
			E	Oryctolagus cuniculus	RABIT11011		ENSOCUG00000008805.3
			E	Ochotona princeps	OCHPR07059		ENSOPRG00000012827
			E	Dipodomys ordii	DIPOR05064		ENSDORG00000002066.2
			E	Fukomys damarensis	FUKDA03374		ENSFDAG00000004988.1
			E	Heterocephalus glaber	HETGA10407		ENSHGLG00100013561.1
			E	Cavia aperea	CAVAP08099		ENSCAPG00000015127.1
			E	Cavia porcellus	CAVPO10992		H0VKP0
			E	Chinchilla lanigera	CHILA18749		A0A8C2V004
			E	Octodon degus	OCTDE03523		A0A6P3EU97
			E	Jaculus jaculus	JACJA13186		A0A8C5LI66
			E	Cricetulus griseus	CRIGR12555		ENSCGRG00000013932.1
			E	Mus musculus	MOUSE57774		A0A0R4IZW5
			E	Rattus norvegicus	RATNO14841		CADH1_RAT
			E	Nannospalax galili	NANGA17854		A0A8C6R0W0
			E	Ictidomys tridecemlineatus	ICTTR11874		ENSSTOG00000006068
			E	Cercocebus atys	CERAT01096		A0A2K5NJL2
			E	Chlorocebus sabaeus	CHLSB14825		A0A0D9QVR1
			E	Macaca fascicularis	MACFA25218		A0A2K5V299
			E	Macaca mulatta	MACMU26370		F7H4U0
			E	Macaca nemestrina	MACNE07734		A0A2K6DE66

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