Pairwise Orthologs for HUMAN29098

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN29098 (A0A2R8Y6C1)

E Homo sapiens | CCCTC-binding factor [CTCF]

‹

This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN29097.

Loading, please wait...

Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Dictyostelium discoideum	DICDI06354		Q54UG9
			E	Capsaspora owczarzaki (strain ATCC 30864)	CAPO307414		CAOG_06207
			E	Petromyzon marinus	PETMA09418		S4RHK7
			E	Scyliorhinus torazame	SCYTO07280		A0A401NQV9
			E	Chiloscyllium punctatum	CHIPU05402		A0A401S9E8
			E	Callorhinchus milii	CALMI09514		A0A4W3K399
			E	Lepisosteus oculatus	LEPOC09303		W5MIX9
			E	Anguilla anguilla	ANGAN51297		XP_035251177
			E	Anabas testudineus	ANATE13606		A0A3Q1H7D2
			E	Echeneis naucrates	ECHNA23500		A0A665TSC3
			E	Cynoglossus semilaevis	CYNSE24715		A0A3P8X5V9
			E	Tetraodon nigroviridis	TETNG11171		H3CV96
			E	Oryzias javanicus	ORYJA30612		ENSOJAG00000000319.1
			E	Oryzias latipes	ORYLA20284		ENSORLG00000018357
			E	Oryzias melastigma	ORYME04606		A0A3B3CRT4
			E	Nothobranchius furzeri	NOTFU11845		A0A1A8UQ71
			E	Kryptolebias marmoratus	KRYMA22902		A0A3Q3A6T2
			E	Gambusia affinis	GAMAF26805		ENSGAFG00000003070.1
			E	Salarias fasciatus	SALFA27201		A0A672F4E9
			E	Haplochromis burtoni	HAPBU17577		A0A3Q2V997
			E	Amphilophus citrinellus	AMPCI18194		A0A3Q0SLI1
			E	Amphiprion ocellaris	AMPOC08299		A0A3Q1ARQ9
			E	Amphiprion percula	AMPPE33238		A0A3P8TQU9
			E	Gadus morhua	GADMO60767		A0A8C4Z3Z4
			E	Salmo salar	SALSA93121		ENSSSAG00000095664.1

Showing 1 to 25 of 25 rows rows per page