Pairwise Orthologs for HUMAN27554

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN27554 (CD19_HUMAN)

E Homo sapiens | B-lymphocyte antigen CD19 [CD19]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN27553.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Tachyglossus aculeatus	TACAU21849		XP_038619667
			E	Procavia capensis	PROCA12311		ENSPCAG00000015699
			E	Loxodonta africana	LOXAF05492		G3U4G1
			E	Echinops telfairi	ECHTE05610		ENSETEG00000013627
			E	Oryctolagus cuniculus	RABIT11294		G1TWR4
			E	Ochotona princeps	OCHPR00870		ENSOPRG00000013931
			E	Dipodomys ordii	DIPOR07866		ENSDORG00000011641.2
			E	Heterocephalus glaber	HETGA20195		ENSHGLG00100000838.1
			E	Cavia porcellus	CAVPO03122		H0UXI6
			E	Chinchilla lanigera	CHILA19664		A0A8C2VES5
			E	Octodon degus	OCTDE00102		ENSODEG00000015285.1
			E	Jaculus jaculus	JACJA22255		A0A8C5L5X6
			E	Cricetulus griseus	CRIGR21411		ENSCGRG00000002042.1
			E	Mus musculus	MOUSE51405		CD19_MOUSE
			E	Rattus norvegicus	RATNO21215		F1LNH2
			E	Nannospalax galili	NANGA16296		A0A8C6QUY1
			E	Ictidomys tridecemlineatus	ICTTR12711		ENSSTOG00000026333
			E	Cercocebus atys	CERAT36461		A0A2K5M8Y1
			E	Macaca fascicularis	MACFA24586		A0A2K5W8L9
			E	Macaca mulatta	MACMU27401		F7F486
			E	Macaca nemestrina	MACNE37013		A0A2K6CH57
			E	Mandrillus leucophaeus	MANLE13782		A0A2K5Y096
			E	Papio anubis	PAPAN16596		A0A8I5R552
			E	Colobus angolensis palliatus	COLAP30538		A0A2K5JLZ7
			E	Rhinopithecus bieti	RHIBE37435		A0A2K6MY43

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