Pairwise Orthologs for HUMAN26984

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN26984 (I3L262)

E Homo sapiens | Centriolar coiled-coil protein 110 [CCP110]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN26979.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO18986		A0A401PVS3
			E	Chiloscyllium punctatum	CHIPU13815		A0A401SYG1
			E	Callorhinchus milii	CALMI16390		A0A4W3HZM9
			E	Lepisosteus oculatus	LEPOC03647		W5M4J4
			E	Anabas testudineus	ANATE28716		A0A3Q1JK26
			E	Cynoglossus semilaevis	CYNSE12384		A0A3P8W3I9
			E	Scophthalmus maximus	SCOMX14015		ENSSMAG00000015921.1
			E	Dicentrarchus labrax	DICLA47060		XP_051243580
			E	Nothobranchius furzeri	NOTFU05539		A0A1A7ZRA6
			E	Kryptolebias marmoratus	KRYMA14344		A0A3Q3B6K7
			E	Cyprinodon variegatus	CYPVA16810		A0A3Q2EDA0
			E	Poecilia formosa	POEFO08997		A0A087XBR1
			E	Xiphophorus maculatus	XIPMA11010		A0A3B5QQU7
			E	Oreochromis niloticus	ORENI54632		A0A669BJB3
			E	Salmo salar	SALSA111881		ENSSSAG00000004128.2
			E	Latimeria chalumnae	LATCH11012		M3XHP7
			E	Ornithorhynchus anatinus	ORNAN16884		F6TI36
			E	Tachyglossus aculeatus	TACAU22878		XP_038619033
			E	Procavia capensis	PROCA15664		ENSPCAG00000013967
			E	Loxodonta africana	LOXAF05411		G3TN30
			E	Echinops telfairi	ECHTE15137		ENSETEG00000003016
			E	Ochotona princeps	OCHPR09426		ENSOPRG00000002187
			E	Heterocephalus glaber	HETGA17358		A0A0P6J3Z8
			E	Cavia porcellus	CAVPO03433		H0VPF5
			E	Chinchilla lanigera	CHILA11290		A0A8C2VZF1

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