Pairwise Orthologs for HUMAN25208

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN25208 (TTC23_HUMAN)

E Homo sapiens | Tetratricopeptide repeat protein 23 [TTC23]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN25206.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Solemya velum gill symbiont	SOVGS02355		JV46_26800
			B	Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB 11848 / C-107)	NITOC00141		WP_011330246
			E	Naegleria fowleri	NAEFO07398		A0A6A5CBR1
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR500574		F2TWW6
			E	Branchiostoma floridae	BRAFL21461		A0A9J7LLF0
			E	Branchiostoma lanceolatum	BRALA24361		BL06905
			E	Eptatretus burgeri	EPTBU19342		A0A8C4QGZ3
			E	Scyliorhinus torazame	SCYTO08996		A0A401NGL4
			E	Chiloscyllium punctatum	CHIPU17177		A0A401REY3
			E	Callorhinchus milii	CALMI04088		A0A4W3HQV0
			E	Lepisosteus oculatus	LEPOC12015		W5NAU7
			E	Anguilla anguilla	ANGAN51459		XP_035252347
			E	Anabas testudineus	ANATE22158		A0A3Q1ITZ3
			E	Seriola dumerili	SERDU10634		A0A3B4UE20
			E	Echeneis naucrates	ECHNA52658		A0A665TUT1
			E	Scophthalmus maximus	SCOMX00857		ENSSMAG00000002014.1
			E	Dicentrarchus labrax	DICLA41708		XP_051238521
			E	Sparus aurata	SPAAU44721		A0A671WS32
			E	Takifugu rubripes	TAKRU50982		A0A3B5KF42
			E	Tetraodon nigroviridis	TETNG03673		H3DPI0
			E	Nothobranchius furzeri	NOTFU21086		A0A8C6LMS2
			E	Kryptolebias marmoratus	KRYMA03171		A0A3Q3G9U4
			E	Gambusia affinis	GAMAF20532		ENSGAFG00000002291.1
			E	Poecilia formosa	POEFO02743		A0A087YMQ7
			E	Poecilia reticulata	POERE28891		A0A3P9NHR2

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