Pairwise Orthologs for HUMAN23312

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN23312 (GRL1A_HUMAN)

E Homo sapiens | DNA-directed RNA polymerase II subunit GRINL1A [POLR2M]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO13096		A0A401NT63
			E	Chiloscyllium punctatum	CHIPU10423		A0A401SNS7
			E	Callorhinchus milii	CALMI04783		V9KYD8
			E	Anabas testudineus	ANATE13628		A0A7N6A801
			E	Seriola dumerili	SERDU05552		A0A3B4V3C3
			E	Echeneis naucrates	ECHNA23930		A0A665U7J1
			E	Cynoglossus semilaevis	CYNSE00028		A0A3P8WSY4
			E	Scophthalmus maximus	SCOMX25971		A0A8D2ZDV4
			E	Dicentrarchus labrax	DICLA39713		A0A8C4FC96
			E	Sparus aurata	SPAAU27071		A0A671YMV6
			E	Mola mola	MOLML05814		A0A3Q3X0Q5
			E	Takifugu rubripes	TAKRU09386		A0A3B5K3E5
			E	Oryzias javanicus	ORYJA16244		ENSOJAG00000023719.1
			E	Nothobranchius furzeri	NOTFU11870		A0A1A8UKR8
			E	Kryptolebias marmoratus	KRYMA02937		A0A3Q3FAY0
			E	Cyprinodon variegatus	CYPVA20611		A0A3Q2CHE6
			E	Gambusia affinis	GAMAF17974		A0A315V167
			E	Poecilia formosa	POEFO19254		A0A096MH83
			E	Poecilia reticulata	POERE24154		A0A3P9QJN2
			E	Xiphophorus maculatus	XIPMA28254		M4AIV8
			E	Salarias fasciatus	SALFA56433		A0A672IS40
			E	Astatotilapia calliptera	ASTCA19537		A0A3P8NHQ0
			E	Haplochromis burtoni	HAPBU14513		A0A3Q2X0W1
			E	Neolamprologus brichardi	NEOBR00475		A0A3Q4MKH6
			E	Oreochromis aureus	OREAU24062		A0A668UUC6

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