Pairwise Orthologs for HUMAN20341

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN20341 (PLGF_HUMAN)

E Homo sapiens | Placenta growth factor [PGF]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN20338.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Petromyzon marinus	PETMA08373		S4RNX3
			E	Scyliorhinus torazame	SCYTO16791		A0A401Q3C1
			E	Chiloscyllium punctatum	CHIPU18228		A0A401RMN3
			E	Callorhinchus milii	CALMI44414		A0A4W3GZ63
			E	Anabas testudineus	ANATE10925		A0A3Q1KDA7
			E	Echeneis naucrates	ECHNA41139		A0A665WWY5
			E	Cynoglossus semilaevis	CYNSE16215		A0A3P8UDF3
			E	Scophthalmus maximus	SCOMX13646		A0A8D3A3I2
			E	Dicentrarchus labrax	DICLA04872		XP_051251886
			E	Mola mola	MOLML21413		A0A3Q4ADM0
			E	Tetraodon nigroviridis	TETNG04769		Q4SCW7
			E	Oryzias javanicus	ORYJA29192		ENSOJAG00000008254.1
			E	Oryzias melastigma	ORYME09695		A0A3B3CTA8
			E	Nothobranchius furzeri	NOTFU25639		LOC107392368
			E	Poecilia formosa	POEFO06460		A0A096MBJ5
			E	Salarias fasciatus	SALFA23069		A0A672GGP1
			E	Astatotilapia calliptera	ASTCA18452		A0A3P8QZ76
			E	Haplochromis burtoni	HAPBU03904		A0A3Q2X114
			E	Amphiprion ocellaris	AMPOC15607		A0A3Q1CSB5
			E	Amphiprion percula	AMPPE23308		A0A3P8UF22
			E	Gadus morhua	GADMO32056		A0A8C4ZF59
			E	Esox lucius	ESOLU44319		A0A3P8XW28
			E	Salmo trutta	SALTR53265		A0A674AH78
			E	Astyanax mexicanus	ASTMX16555		A0A8T2LAB2
			E	Ictalurus punctatus	ICTPU35436		A0A2D0RQE4

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