Pairwise Orthologs for HUMAN18615

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN18615 (H0YKX0)

E Homo sapiens | RBR-type E3 ubiquitin transferase | Ring finger protein 31 [RNF31]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN18612.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Eptatretus burgeri	EPTBU16741		A0A8C4QP05
			E	Seriola dumerili	SERDU14615		A0A3B4TIV2
			E	Cynoglossus semilaevis	CYNSE21601		A0A3P8W8T6
			E	Kryptolebias marmoratus	KRYMA09019		A0A3Q3BHG3
			E	Cyprinodon variegatus	CYPVA12952		A0A3Q2DQG4
			E	Poecilia formosa	POEFO13340		A0A087X7J4
			E	Poecilia reticulata	POERE17734		A0A3P9QI31
			E	Xiphophorus maculatus	XIPMA18813		M3ZQS2
			E	Salarias fasciatus	SALFA02790		A0A672GHS3
			E	Astyanax mexicanus	ASTMX16061		A0A8B9RGM1
			E	Pygocentrus nattereri	PYGNA15251		A0A3B4EEE5
			E	Ictalurus punctatus	ICTPU14928		ENSIPUG00000002244.1
			E	Danio rerio	DANRE30123		ENSDARG00000090770.3
			E	Latimeria chalumnae	LATCH03504		H2ZW95
			E	Ornithorhynchus anatinus	ORNAN05017		A0A6I8NWQ0
			E	Tachyglossus aculeatus	TACAU14671		XP_038597126
			E	Procavia capensis	PROCA13480		ENSPCAG00000015347
			E	Loxodonta africana	LOXAF03163		G5E703
			E	Echinops telfairi	ECHTE12963		ENSETEG00000018371
			E	Oryctolagus cuniculus	RABIT06399		ENSOCUG00000002861.2
			E	Ochotona princeps	OCHPR09015		ENSOPRG00000016576
			E	Dipodomys ordii	DIPOR15836		A0A1S3FWV2
			E	Fukomys damarensis	FUKDA15017		ENSFDAG00000018992.1
			E	Heterocephalus glaber	HETGA24715		ENSHGLG00100006552.1
			E	Cavia aperea	CAVAP05614		ENSCAPG00000015549.1

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