Pairwise Orthologs for HUMAN16617

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN16617 (LNX2_HUMAN)

E Homo sapiens | Ligand of Numb protein X 2 [LNX2]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN16616.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Eptatretus burgeri	EPTBU10217		A0A8C4N408
			E	Scyliorhinus torazame	SCYTO05054		A0A401P2N8
			E	Chiloscyllium punctatum	CHIPU05787		A0A401SAJ6
			E	Callorhinchus milii	CALMI26912		A0A4W3HTU0
			E	Lepisosteus oculatus	LEPOC11077		W5M9I7
			E	Anabas testudineus	ANATE01500		ENSATEG00000010632.1
			E	Seriola dumerili	SERDU21114		A0A3B4UP14
			E	Echeneis naucrates	ECHNA37767		A0A665UVE6
			E	Cynoglossus semilaevis	CYNSE21670		A0A3P8WH89
			E	Scophthalmus maximus	SCOMX18271		A0A2U9CVI5
			E	Dicentrarchus labrax	DICLA18946		A0A8P4GFA1
			E	Gasterosteus aculeatus	GASAC02748		G3NFF7
			E	Sparus aurata	SPAAU46220		A0A671U137
			E	Mola mola	MOLML00903		A0A3Q3W5E3
			E	Takifugu rubripes	TAKRU02223		A0A674MBG7
			E	Tetraodon nigroviridis	TETNG11761		H3D596
			E	Oryzias javanicus	ORYJA25926		A0A437C825
			E	Oryzias latipes	ORYLA09110		ENSORLG00000008783
			E	Oryzias melastigma	ORYME19964		A0A3B3D749
			E	Nothobranchius furzeri	NOTFU13503		A0A1A8U5Z5
			E	Kryptolebias marmoratus	KRYMA03671		A0A3Q3AKN0
			E	Cyprinodon variegatus	CYPVA28735		A0A3Q2DYL3
			E	Gambusia affinis	GAMAF07984		ENSGAFG00000007199.1
			E	Poecilia formosa	POEFO07497		A0A087XPM6
			E	Poecilia reticulata	POERE17583		A0A3P9Q487

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