Pairwise Orthologs for HUMAN16121

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN16121 (PITM2_HUMAN)

E Homo sapiens | Membrane-associated phosphatidylinositol transfer [PITPNM2]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Eptatretus burgeri	EPTBU14602		A0A8C4QE87
			E	Chiloscyllium punctatum	CHIPU18312		A0A401RNF9
			E	Callorhinchus milii	CALMI38068		A0A4W3JRY6
			E	Lepisosteus oculatus	LEPOC08178		W5MEK2
			E	Echeneis naucrates	ECHNA22145		A0A665WCW8
			E	Dicentrarchus labrax	DICLA29280		XP_051279753
			E	Mola mola	MOLML13163		A0A3Q4BP59
			E	Takifugu rubripes	TAKRU31054		A0A674N131
			E	Oryzias javanicus	ORYJA43513		ENSOJAG00000016241.1
			E	Salarias fasciatus	SALFA08602		A0A672JTV5
			E	Astatotilapia calliptera	ASTCA05552		A0A3P8R0G0
			E	Oreochromis aureus	OREAU11227		A0A668VQG7
			E	Astyanax mexicanus	ASTMX20313		ENSAMXG00000009034
			E	Electrophorus electricus	ELEEL05816		A0A4W4HBP2
			E	Ictalurus punctatus	ICTPU09238		A0A2D0SPB4
			E	Danio rerio	DANRE51871		ENSDARG00000111528.1
			E	Latimeria chalumnae	LATCH18398		H3BDS3
			E	Ornithorhynchus anatinus	ORNAN16826		A0A6I8PJK6
			E	Tachyglossus aculeatus	TACAU22267		XP_038618454
			E	Procavia capensis	PROCA08030		ENSPCAG00000009171
			E	Loxodonta africana	LOXAF03852		G3TMC1
			E	Echinops telfairi	ECHTE08568		ENSETEG00000008415
			E	Oryctolagus cuniculus	RABIT18131		ENSOCUG00000000493.3
			E	Ochotona princeps	OCHPR04216		ENSOPRG00000017107
			E	Dipodomys ordii	DIPOR17383		ENSDORG00000014639.2

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