Pairwise Orthologs for HUMAN15132

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN15132 (RPC2_HUMAN)

E Homo sapiens | DNA-directed RNA polymerase III subunit RPC2 [POLR3B]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN15131.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP)	ACIFD00376		WP_015797860
			B	Acidothermus cellulolyticus (strain ATCC 43068 / DSM 8971 / 11B)	ACIC100297		Acel_0299
			B	Arcanobacterium haemolyticum (strain ATCC 9345 / DSM 20595 / CCUG 17215 / LMG 16163 / NBRC 15585 / NCTC 8452 / 11018)	ARCHD01321		WP_013170589
			B	Mobiluncus curtisii (strain ATCC 43063 / DSM 2711 / V125)	MOBCV00967		rpoB
			B	Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432)	BEUC103133		WP_015883639
			B	Bifidobacterium animalis subsp. animalis (strain ATCC 25527 / DSM 20104 / JCM 1190 / R101-8)	BIFAR01285		A0AAC9CG03
			B	Bifidobacterium animalis subsp. lactis (strain AD011)	BIFA000538		A0A315S068
			B	Bifidobacterium animalis subsp. lactis (strain BB-12)	BIFAB00225		A0A315S068
			B	Bifidobacterium animalis subsp. lactis (strain Bl-04 / DGCC2908 / RB 4825 / SD5219)	BIFLB01293		A0A315S068
			B	Bifidobacterium animalis subsp. lactis (strain DSM 10140 / JCM 10602 / LMG 18314)	BIFAS01293		A0A315S068
			B	Bifidobacterium animalis subsp. lactis (strain V9)	BIFAV01297		A0A315S068
			B	Bifidobacterium asteroides (strain PRL2011)	BIFAP00394		BAST_0407
			B	Bifidobacterium bifidum (strain PRL2010)	BIFBP00379		rpoB
			B	Bifidobacterium bifidum (strain S17)	BIFBS00442		BBIF_0442
			B	Bifidobacterium breve (strain ACS-071-V-Sch8b)	BIFBA01262		A0A0L0LU55
			B	Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12)	BIFLS02410		B7GUG7
			B	Bifidobacterium longum (strain DJO10A)	BIFLD00949		BLD_0965
			B	Bifidobacterium longum (strain NCC 2705)	BIFLO00847		Q8G514
			B	Bifidobacterium longum subsp. infantis (strain 157F)	BIFL100409		BLIF_0422
			B	Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b)	BIFL200399		BLLJ_0405
			B	Bifidobacterium longum subsp. longum (strain BBMN68)	BIFLM00947		A0A0A1GRX3
			B	Bifidobacterium longum subsp. longum (strain JDM301)	BIFLJ00435		BLJ_0466
			B	Gardnerella vaginalis (strain 409-05)	GARV401092		HMPREF0424_1169
			B	Gardnerella vaginalis (strain ATCC 14019 / 317)	GARV301204		rpoB
			B	Gardnerella vaginalis (strain HMP9231)	GARVH00300		rpoB

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