Pairwise Orthologs for HUMAN14196

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN14196 (CBPM_HUMAN)

E Homo sapiens | Carboxypeptidase M [CPM]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ)	HALMS02321		WP_014245040
			E	Branchiostoma lanceolatum	BRALA31073		BL02554
			E	Eptatretus burgeri	EPTBU12161		A0A8C4Q5D9
			E	Scyliorhinus torazame	SCYTO06777		A0A401NHN1
			E	Lepisosteus oculatus	LEPOC16625		W5NH45
			E	Anguilla anguilla	ANGAN57554		XP_035257747
			E	Anabas testudineus	ANATE02681		A0A3Q1KEP6
			E	Seriola dumerili	SERDU03477		A0A3B4UM71
			E	Cynoglossus semilaevis	CYNSE28539		A0A3P8V0R8
			E	Scophthalmus maximus	SCOMX21551		ENSSMAG00000009923.1
			E	Dicentrarchus labrax	DICLA51880		A0A8P4GAD8
			E	Mola mola	MOLML00449		A0A3Q4AT78
			E	Takifugu rubripes	TAKRU19265		A0A674NJ51
			E	Tetraodon nigroviridis	TETNG07341		H3DN02
			E	Oryzias javanicus	ORYJA05492		ENSOJAG00000023343.1
			E	Oryzias latipes	ORYLA11273		ENSORLG00000017311
			E	Oryzias melastigma	ORYME26734		A0A3B3CTV2
			E	Nothobranchius furzeri	NOTFU01821		A0A1A7ZHE3
			E	Cyprinodon variegatus	CYPVA14427		A0A3Q2CAX3
			E	Gambusia affinis	GAMAF28475		ENSGAFG00000000280.1
			E	Poecilia formosa	POEFO20992		A0A087X522
			E	Poecilia reticulata	POERE20799		A0A3P9NCH2
			E	Xiphophorus maculatus	XIPMA11219		A0A3B5QIK6
			E	Salarias fasciatus	SALFA08684		A0A672FSD6
			E	Astatotilapia calliptera	ASTCA14239		A0A3P8P9D0

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