Pairwise Orthologs for HUMAN13653

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN13653 (NXPH4_HUMAN)

E Homo sapiens | Neurexophilin-4 [NXPH4]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Anguilla anguilla	ANGAN38205		XP_035237061
			E	Cynoglossus semilaevis	CYNSE03739		A0A3P8VS59
			E	Hippocampus comes	HIPCM13241		A0A3Q3D1U9
			E	Esox lucius	ESOLU50618		A0A3P9ADM2
			E	Salmo trutta	SALTR33529		A0A674BFI2
			E	Tachyglossus aculeatus	TACAU12143		XP_038608002
			E	Loxodonta africana	LOXAF19593		G3T7N3
			E	Dipodomys ordii	DIPOR01176		A0A1S3FHR6
			E	Heterocephalus glaber	HETGA17947		ENSHGLG00100017924.1
			E	Chinchilla lanigera	CHILA14919		A0A8C2W1E0
			E	Octodon degus	OCTDE25450		A0A6P3FJI5
			E	Jaculus jaculus	JACJA01002		A0A8C5K232
			E	Cricetulus griseus	CRIGR16814		ENSCGRG00000014235.1
			E	Mus musculus	MOUSE01059		G3X9N5
			E	Rattus norvegicus	RATNO38181		A0A0G2JSW7
			E	Nannospalax galili	NANGA23297		A0A8C6RBM3
			E	Ictidomys tridecemlineatus	ICTTR16733		I3N991
			E	Cercocebus atys	CERAT33713		A0A2K5MGL2
			E	Chlorocebus sabaeus	CHLSB02352		A0A0D9QY16
			E	Macaca fascicularis	MACFA03488		ENSMFAG00000042434.1
			E	Macaca mulatta	MACMU05433		F7DEE6
			E	Macaca nemestrina	MACNE24007		A0A2K6DSN4
			E	Mandrillus leucophaeus	MANLE29874		A0A2K5YEY6
			E	Papio anubis	PAPAN41175		A0A8I5NNH3
			E	Colobus angolensis palliatus	COLAP17239		A0A2K5K444

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