Pairwise Orthologs for HUMAN13033

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN13033 (F8VWG7)

E Homo sapiens | Activating transcription factor 7 [ATF7]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN13029.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Zootermopsis nevadensis	ZOONE12058		A0A067R1N2
			E	Cyberlindnera fabianii	CYBFA02617		A0A061AYL9
			E	Branchiostoma lanceolatum	BRALA10734		BL07245
			E	Eptatretus burgeri	EPTBU21052		A0A8C4MZG5
			E	Callorhinchus milii	CALMI41128		A0A4W3HKN4
			E	Lepisosteus oculatus	LEPOC12502		W5MIW7
			E	Anabas testudineus	ANATE20469		ENSATEG00000020751.1
			E	Seriola dumerili	SERDU11249		A0A3B4U7P9
			E	Echeneis naucrates	ECHNA01360		A0A665UDC5
			E	Cynoglossus semilaevis	CYNSE01421		A0A3P8UQN3
			E	Scophthalmus maximus	SCOMX02367		ENSSMAG00000019511.1
			E	Dicentrarchus labrax	DICLA32445		XP_051282848
			E	Gasterosteus aculeatus	GASAC11634		G3P0K5
			E	Sparus aurata	SPAAU53243		A0A671YI95
			E	Mola mola	MOLML21023		A0A3Q3VTZ0
			E	Takifugu rubripes	TAKRU37169		H2UUT0
			E	Tetraodon nigroviridis	TETNG13444		H3DCB9
			E	Oryzias javanicus	ORYJA19406		ENSOJAG00000017440.1
			E	Oryzias latipes	ORYLA15705		ENSORLG00000006799
			E	Oryzias melastigma	ORYME05299		A0A3B3DUD9
			E	Nothobranchius furzeri	NOTFU23736		A0A1A8A9F0
			E	Kryptolebias marmoratus	KRYMA20830		A0A3Q3F614
			E	Gambusia affinis	GAMAF18109		ENSGAFG00000004341.1
			E	Poecilia formosa	POEFO08474		A0A087Y526
			E	Poecilia reticulata	POERE30783		A0A3P9QGV6

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