Pairwise Orthologs for HUMAN11819

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN11819 (PTHR_HUMAN)

E Homo sapiens | Parathyroid hormone-related protein [PTHLH]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Callorhinchus milii	CALMI34144		D8X185
			E	Lepisosteus oculatus	LEPOC16739		W5NIC8
			E	Anguilla anguilla	ANGAN57856		XP_035257359
			E	Scophthalmus maximus	SCOMX00463		ENSSMAG00000008692.1
			E	Oryzias javanicus	ORYJA30601		A0A3S2N1V5
			E	Kryptolebias marmoratus	KRYMA28837		A0A3Q3AGG6
			E	Poecilia formosa	POEFO22227		A0A087XA15
			E	Poecilia reticulata	POERE00035		A0A3P9Q0V7
			E	Haplochromis burtoni	HAPBU22685		A0A3Q3CGV6
			E	Hippocampus comes	HIPCM27737		A0A3Q3DLI0
			E	Astyanax mexicanus	ASTMX02146		A0A8B9JPL2
			E	Pygocentrus nattereri	PYGNA22758		A0A3B4BSR1
			E	Electrophorus electricus	ELEEL12735		A0A4W4DQB9
			E	Ictalurus punctatus	ICTPU06956		W5UMS6
			E	Danio rerio	DANRE33217		Q5SPK3
			E	Latimeria chalumnae	LATCH08388		H3AXE0
			E	Ornithorhynchus anatinus	ORNAN15382		F6RX78
			E	Tachyglossus aculeatus	TACAU03063		XP_038596403
			E	Loxodonta africana	LOXAF19193		G3TH61
			E	Echinops telfairi	ECHTE10350		ENSETEG00000018412
			E	Oryctolagus cuniculus	RABIT12158		G1T697
			E	Ochotona princeps	OCHPR06074		ENSOPRG00000000360
			E	Dipodomys ordii	DIPOR21416		ENSDORG00000026766.1
			E	Fukomys damarensis	FUKDA14510		ENSFDAG00000003683.1
			E	Heterocephalus glaber	HETGA02622		A0A0P6K198

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