Pairwise Orthologs for HUMAN100681

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN100681 (PAGE4_HUMAN)

E Homo sapiens | P antigen family member 4 [PAGE4]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Cercocebus atys	CERAT45244		A0A2K5KPW0
			E	Chlorocebus sabaeus	CHLSB18467		A0A0D9RK36
			E	Macaca fascicularis	MACFA44297		A0A2K5X3Q9
			E	Macaca mulatta	MACMU48573		A0A5F7ZHD7
			E	Macaca nemestrina	MACNE41832		A0A2K6DG54
			E	Mandrillus leucophaeus	MANLE21945		A0A2K5XZ90
			E	Papio anubis	PAPAN42976		A0A096NB63
			E	Colobus angolensis palliatus	COLAP32652		A0A2K5HL46
			E	Rhinopithecus bieti	RHIBE41337		A0A2K6N0T4
			E	Rhinopithecus roxellana	RHIRO42968		A0A2K6Q431
			E	Gorilla gorilla gorilla	GORGO43618		G3QDC4
			E	Pan paniscus	PANPA41370		A0A2R9BI72
			E	Pongo abelii	PONAB36832		A0A8I5TEY3
			E	Nomascus leucogenys	NOMLE39103		G1R9J0
			E	Aotus nancymaae	AOTNA34679		A0A2K5DQZ9
			E	Callithrix jacchus	CALJA47397		A0A8I3W590
			E	Cebus imitator	CEBIM34520		A0A2K5RKT7
			E	Saimiri boliviensis boliviensis	SAIBB31919		A0A2K6T956
			E	Propithecus coquereli	PROCO31863		A0A2K6EG54
			E	Tupaia belangeri	TUPBE02215		ENSTBEG00000003666
			E	Bos indicus x Bos taurus	BOBOX23650		A0A4W2BTT4
			E	Bos taurus	BOVIN37069		A2VDY9
			E	Capra hircus	CAPHI30710		A0A452FXD1
			E	Ovis aries	SHEEP09025		W5PEQ5
			E	Sus scrofa	PIGXX37325		A0A4X1VL90

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