Pairwise Orthologs for HUMAN05757

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN05757 (Q13133)

E Homo sapiens | Nuclear receptor subfamily 1 group H member 3 [NR1H3]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN05770.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO18751		A0A401PQW2
			E	Chiloscyllium punctatum	CHIPU18100		A0A401RM17
			E	Lepisosteus oculatus	LEPOC10672		W5MH03
			E	Anguilla anguilla	ANGAN19575		A0A9D3S144
			E	Anabas testudineus	ANATE14106		A0A7N6AT50
			E	Seriola dumerili	SERDU14779		A0A3B4URV4
			E	Echeneis naucrates	ECHNA25134		A0A665WFA3
			E	Cynoglossus semilaevis	CYNSE00342		A0A3P8W4L5
			E	Scophthalmus maximus	SCOMX25454		ENSSMAG00000009312.1
			E	Dicentrarchus labrax	DICLA39014		A0A8C4I4L6
			E	Gasterosteus aculeatus	GASAC17772		G3PYI0
			E	Sparus aurata	SPAAU25396		A0A671V537
			E	Mola mola	MOLML06239		A0A3Q3VXX5
			E	Takifugu rubripes	TAKRU08097		H2UYA8
			E	Tetraodon nigroviridis	TETNG11467		H3CW30
			E	Oryzias javanicus	ORYJA14148		ENSOJAG00000000605.1
			E	Oryzias latipes	ORYLA12115		ENSORLG00000001286
			E	Oryzias melastigma	ORYME02908		A0A3B3D6F2
			E	Nothobranchius furzeri	NOTFU12405		A0A1A8UIF2
			E	Kryptolebias marmoratus	KRYMA09121		A0A3Q3ENZ1
			E	Cyprinodon variegatus	CYPVA02083		A0A3Q2EFE6
			E	Gambusia affinis	GAMAF11373		ENSGAFG00000013254.1
			E	Poecilia formosa	POEFO15587		A0A087XDB7
			E	Poecilia reticulata	POERE24285		A0A3P9N987
			E	Xiphophorus maculatus	XIPMA27391		M3ZCS2

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