Pairwise Orthologs for HUMAN03122

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN03122 (F204A_HUMAN)

E Homo sapiens | Protein FAM204A [FAM204A]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Piromyces sp. (strain E2)	PIRSE02427		A0A1Y3NKP3
			E	Rhizophagus irregularis (strain DAOM 197198w)	RHIIW08135		A0A015LXB3
			E	Branchiostoma floridae	BRAFL13401		C3YUD3
			E	Chiloscyllium punctatum	CHIPU00592		A0A401RVQ1
			E	Callorhinchus milii	CALMI31661		A0A4W3KF43
			E	Lepisosteus oculatus	LEPOC13766		W5MU01
			E	Anguilla anguilla	ANGAN56694		XP_035256718
			E	Anabas testudineus	ANATE09085		ENSATEG00000011567.1
			E	Seriola dumerili	SERDU12257		A0A3B4V6P4
			E	Cynoglossus semilaevis	CYNSE05092		A0A3P8VJE5
			E	Scophthalmus maximus	SCOMX08489		ENSSMAG00000013322.1
			E	Dicentrarchus labrax	DICLA02490		A0A8P4KML6
			E	Sparus aurata	SPAAU11128		A0A671XM58
			E	Mola mola	MOLML01384		A0A3Q3WPI1
			E	Oryzias javanicus	ORYJA46304		ENSOJAG00000019712.1
			E	Oryzias latipes	ORYLA05295		ENSORLG00000014133
			E	Oryzias melastigma	ORYME08882		A0A3B3CCV3
			E	Nothobranchius furzeri	NOTFU04314		A0A1A7ZNG8
			E	Kryptolebias marmoratus	KRYMA16068		A0A3Q3AFC1
			E	Cyprinodon variegatus	CYPVA01234		A0A3Q2CFR3
			E	Gambusia affinis	GAMAF03541		ENSGAFG00000000608.1
			E	Poecilia formosa	POEFO14314		A0A087XQD6
			E	Poecilia reticulata	POERE09377		A0A3P9N0D4
			E	Xiphophorus maculatus	XIPMA20001		A0A3B5QX80
			E	Salarias fasciatus	SALFA53106		A0A672GUV5

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