Pairwise Orthologs for HUMAN01585

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN01585 (A0A5F9ZGP6)

E Homo sapiens | Activating signal cointegrator 1 complex subunit 1 [ASCC1]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN01581.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Acanthamoeba castellanii str. Neff	ACACA05543		L8H5E2
			E	Salpingoeca rosetta (strain ATCC 50818 / BSB-021)	SALR505381		F2UA63
			E	Rhizophagus irregularis (strain DAOM 197198w)	RHIIW19766		A0A015IM45
			E	Absidia glauca	ABSGL04500		A0A168P4C0
			E	Phycomyces blakesleeanus	PHYBL04296		fgenesh1_kg.5_#_23_#
			E	Syncephalastrum racemosum	SYNRA03161		A0A1X2HQN5
			E	Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638)	CONC201342		A0A137PFQ6
			E	Branchiostoma floridae	BRAFL28168		C3YXH6
			E	Branchiostoma lanceolatum	BRALA05826		BL08400
			E	Eptatretus burgeri	EPTBU21408		A0A8C4QV89
			E	Chiloscyllium punctatum	CHIPU15445		A0A401T373
			E	Callorhinchus milii	CALMI02301		A0A4W3GQE8
			E	Lepisosteus oculatus	LEPOC13500		W5MD86
			E	Anguilla anguilla	ANGAN05772		XP_035262589
			E	Anabas testudineus	ANATE32963		A0A3Q1JG53
			E	Seriola dumerili	SERDU04741		A0A3B4V7S0
			E	Echeneis naucrates	ECHNA47199		A0A665X4J5
			E	Cynoglossus semilaevis	CYNSE27820		A0A3P8WPL8
			E	Scophthalmus maximus	SCOMX12674		A0A2U9CMR4
			E	Dicentrarchus labrax	DICLA25428		E6ZHI9
			E	Gasterosteus aculeatus	GASAC03021		G3NCP1
			E	Sparus aurata	SPAAU31734		A0A671XWV6
			E	Mola mola	MOLML12178		A0A3Q3WKK5
			E	Takifugu rubripes	TAKRU24754		H2U4H3
			E	Tetraodon nigroviridis	TETNG14058		H3DPZ8

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