Pairwise Orthologs for HUMAN01326

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN01326 (S4R3E2)

E Homo sapiens | DnaJ heat shock protein family (Hsp40) member C12 [DNAJC12]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Capsaspora owczarzaki (strain ATCC 30864)	CAPO303282		A0A0D2UJJ9
			E	Absidia glauca	ABSGL01404		A0A163IWT0
			E	Branchiostoma floridae	BRAFL08404		A0A9J7MIR9
			E	Branchiostoma lanceolatum	BRALA03731		BL08875
			E	Petromyzon marinus	PETMA04001		S4R9E6
			E	Scyliorhinus torazame	SCYTO19012		A0A401PWE4
			E	Chiloscyllium punctatum	CHIPU20849		A0A401RMG9
			E	Callorhinchus milii	CALMI02203		A0A4W3GCR6
			E	Lepisosteus oculatus	LEPOC13894		W5MZM9
			E	Anguilla anguilla	ANGAN56291		A0A9D3LKN4
			E	Anabas testudineus	ANATE09115		A0A3Q1JSP3
			E	Seriola dumerili	SERDU12220		A0A3B4V213
			E	Echeneis naucrates	ECHNA09833		A0A665TLT5
			E	Cynoglossus semilaevis	CYNSE10154		A0A3P8WI49
			E	Scophthalmus maximus	SCOMX08455		A0A2U9CCL6
			E	Dicentrarchus labrax	DICLA02448		A0A8P4K585
			E	Gasterosteus aculeatus	GASAC09731		G3NGK5
			E	Sparus aurata	SPAAU09630		A0A671TS70
			E	Mola mola	MOLML01407		A0A3Q3W423
			E	Takifugu rubripes	TAKRU38879		A0A3B5K3I8
			E	Oryzias javanicus	ORYJA45285		ENSOJAG00000010555.1
			E	Oryzias latipes	ORYLA05276		ENSORLG00000013658
			E	Oryzias melastigma	ORYME08857		A0A3B3CDV2
			E	Nothobranchius furzeri	NOTFU04301		A0A9D3BR89
			E	Kryptolebias marmoratus	KRYMA16096		A0A3Q3FD23

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